YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: Ate1-PC
Organism: Drosophila melanogaster
Length: 478 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Ate1-PC.

Description E-value Query
Range
Subject
Range
gi|114633211 - gi|114633211|ref|XP_508079.2| PREDICTED: arginyltransferase 1 [Pan troglodytes]
555.0 [0..4] [478..71]

Back

Predicted Domain #1
Region A:
Residues: [1-96]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSIVSYYG SQQSKCGYCA GANCSLSHGM HAYQLDCRDY QDLIDRGWRR CGYYCYKLRN  60
   61 QETCCPCYTI KCNGLEFKLS KSNKRILRRI NRFLRD

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 47.657577
Match: PF04376.4
Description: No description for PF04376.4 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [97-202]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKRESKPEAG DGDGEADADY AIVAPEVTAS EPQPQLPDKS PPVINVEQVA SLATAQRKPT  60
   61 KQATAAAVEA PTLGSNKSAA PISNKPCKKA KQMRLDRRLA KLGDSA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [203-394]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SYSTKSLTQE KTLRDFLNTD SETNKHRLKI VLVASSDTER TCADAVIALY RKYQITVHND  60
   61 NPARLTLASM QRFLVKSPLK NEKPWDGPEM GYGSFHQQYW LDDKLIAVGV IDILPGCVSS 120
  121 VYFFYDPDYS FLSLGTYGSL REIELVQSLA EKVPSLKYYY MGFYIHSCPK MRYKGKLSPS 180
  181 YLLCPETYEW LP

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 85.79588
Match: PF04377.6
Description: No description for PF04377.6 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [395-478]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LTDVIRAKLD EHKYQRLNED PAARDVNEFL MEHLDEVKLL LGGRTRTDYK HFRQLRGTVS  60
   61 DDDIIIEYSK LVGKECARRM LYVK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle