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View Structure Prediction Details

Protein: vimar-PC
Organism: Drosophila melanogaster
Length: 635 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for vimar-PC.

Description E-value Query
Range
Subject
Range
gi|45544511 - gi|45544511|dbj|BAD12593.1| beta-catenin [Branchiostoma belcheri]
291.0 [0..16] [618..146]

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Predicted Domain #1
Region A:
Residues: [1-635]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATAEIDDLI EKLKTTSVSP ANTTNLLCEI SATKDPKLFD KHELAECFLG LTKCDDTNVR  60
   61 KEAAKCIAEI TKSEVQRKKF TKRNIIAAFL ECLRQVPTSD GSMELPIQIC RALGNICYLN 120
  121 DEARDLILEL EGDAVLLRLL DITTIEDVAN AAQFIKVRGG LLSNYLLGGE GLAKRAMELG 180
  181 VMKKLQGIID IGASNVEQHE DLLLNTLPLL SILTENVSDL NFDSSLNIQL SRILAASTNP 240
  241 DLAEMCLELL HYQAESDEVK LILAKDGLCE TIYNLLEKYK TLASTSEARA LMKLACELIV 300
  301 LILTGDDSMH YLYTTPLLKN MVDWLDSTDI DLLTTGVLAL GNFARTDSHC IYFVEQQTMN 360
  361 KLLEVLAKNN GVKDDVRLQH ALLSALRNLV IPKPNKNAVI QAGLVQTILP MLEIHQPPVV 420
  421 FKLLGTLRMT VDGQEKLALE LLKNKTLIEQ LVHWSKSSDY AGVTGESLRL MAWLIKHAYL 480
  481 SKIAYALPRK GDAPAEQIAD KIPLTQDYDR SSLSEFLANE GTVEAMVSML TAQHLVMQNE 540
  541 ALIALCILSV VYLSQPSEAA QAQLLQDELV KCEVGKKLAE LISKSSDTMT KEIVENLQNC 600
  601 VNLLKSSEQL VAHLEQHNIN ELLKSIPILT EYCTL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 67.0
Match: 2gl7A
Description: No description for 2gl7A was found.

Predicted functions:

Term Confidence Notes
binding 0.373576425899935 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle