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View Structure Prediction Details

Protein: CheB42b-PA
Organism: Drosophila melanogaster
Length: 196 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CheB42b-PA.

Description E-value Query
Range
Subject
Range
CheB38c-PA - The gene Chemosensory protein B 38c is referred to in FlyBase by the symbol Dmel\CheB38c (CG14405, F...
286.0 [0..3] [196..4]

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Predicted Domain #1
Region A:
Residues: [1-196]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFVLLLLLG VTSSWATDYE LLLEDPDIFS TCTDGPPGSI NIRQALNLDD IVIDQKGDIL  60
   61 HVSGNATVVW DVQPTDRITA RLDVFHFNRG TWEPTVFSMA TQNFCSIMYD KNQYWYKYWT 120
  121 RFITNRHEVE KKCFRGPDTV LVHEPFDLIL KFENFRGPLL RGRHKLVILF NALDERNIPR 180
  181 PNPICLEIIG EPLKLQ

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.52
Match: 1pu5A
Description: GM2-activator Protein crystal structure
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.150611973436827 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle