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View Structure Prediction Details

Protein: Spn4-PJ
Organism: Drosophila melanogaster
Length: 374 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Spn4-PJ.

Description E-value Query
Range
Subject
Range
gi|481621 - gi|481621|pir||S38962 serpin - pig
373.0 [0..6] [371..1]

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Predicted Domain #1
Region A:
Residues: [1-374]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADAAHQEFA RRLALFSINV YGKLSGQKPG ENIVFSPFSI QTCAAMARLG AENETATQLD  60
   61 QGLGLASSDP EQIAHSFHQV LAAYQDSQIL RIANKIFVMD GYQLRQEFDQ LLSKQFLSAA 120
  121 QSVDFSKNVQ AAATINNWVE QRTNHLIKDL VPADVLNSES RLVLVNAIHF KGTWQHQFAK 180
  181 HLTRPDTFHL DGERTVQVPM MSLKERFRYA DLPALDAMAL ELPYKDSDLS MLIVLPNTKT 240
  241 GLPALEEKLR LTTLSQITQS LYETKVALKL PRFKAEFQVE LSEVFQKLGM SRMFSDQAEF 300
  301 GKMLQSPEPL KVSAIIHKAF IEVNEEGTEA AAATVWRVMA VAAFSRKHFI ANHPFAFYVK 360
  361 THYDLPIFTG RYLG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 94.30103
Match: 1by7A
Description: Plasminogen activator inhibitor-2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle