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View Structure Prediction Details

Protein: CG7861-PB, FBpp0...
Organism: Drosophila melanogaster
Length: 523 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG7861-PB, FBpp0....

Description E-value Query
Range
Subject
Range
gi|113547417, gi... - gi|115450691|ref|NP_001048946.1| Os03g0145000 [Oryza sativa (japonica cultivar-group)], gi|113547417...
331.0 [0..13] [521..64]

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Predicted Domain #1
Region A:
Residues: [1-523]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGIIDEVQL FYPLGTRIKI GDNYGTVRYV GEVSGHMGSW LGIEWDDGLR GKHNGIVDGK  60
   61 RYFQTQTPTG GSFIRPGKVG PCATLEDAAR ERYLNYDSSN VDESLIREAQ ASLQASLFEV 120
  121 VGMDKIARKQ SKFEQLEEVS VDQTPVNAAG YLKELTHLTT LNVSHTLIWN WEIVASIAQQ 180
  181 LPSLTNLNLS SNRLVLPTSS QITELEPSFR QLKRINLRSC GFSDWKDVMH TALLWPNILS 240
  241 LGLQENSLGQ LAEVDRTKIF KQLHELDLHR TNIMDFDQVT KLGNLTTLRL LNIMENGIEE 300
  301 IKLPDCDSQE KLNIFVSLEQ LNLLHNPIWN EADAFNELDK LPQLKRLSKT PHLKSNFDEM 360
  361 FSKAVASIAS LQFINKAEVT AEQRRGAEYD IWKKYALDWM QATQGGTDSL REFCRRHRTY 420
  421 PLLVKKYGSP ADFVPRSQAK QSNLINVSIR HQLTGETWEK KVPRMITVQT LQGLVMKRFR 480
  481 LSGDVPQLCY VDALHPDLVV PLDNNAKTLD FYSVQEHDTV LVQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.045757
Match: 2a0zA
Description: The molecular structure of toll-like receptor 3 ligand binding domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle