| Protein: | CG6995-PA |
| Organism: | Drosophila melanogaster |
| Length: | 666 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG6995-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
174.0 | [0..3] | [534..192] |
|
Region A: Residues: [1-238] |
1 11 21 31 41 51
| | | | | |
1 MELAEKSTAA PGGATSSTAS SAAGSKSGSG SSAGNGTGAN SNNKQATLSR NLWVSGLSTL 60
61 TRASDLKAIF SKFGKVIGAK VVTNTRTPGT RCYGYVTMSS SADASRCIEN LHRTELHGRI 120
121 ISVERTKNEI GGSLNSKEGK GKAPGDAGNK KKEDDSGKKS GSGKGSSSNS GDDKKGGDGN 180
181 GDSKSVGGDL KRDGKESNRA RSRRNDDRGK SLASQDRPRH DRERSAKGSQ DHRSGRNP
|
| Detection Method: |  |
| Confidence: | 15.154902 |
| Match: | 1cvjA |
| Description: | Poly(A)-binding protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [239-563] |
1 11 21 31 41 51
| | | | | |
1 RDVDREIQQR QRERERRQRE MLSYQKIREE RERQRLRERE RELREEERRR REARERQRIE 60
61 EERLQEERRK LAVERERLER EKAELLRMER ERQKLEREKI ELERLELKRQ QMKIMESRDD 120
121 PGKRGVSKRA DDRYGDVTDR KRTAIFDAPP PPRFDTNLVS SRSTYDKKHD DYGSSSSTKR 180
181 VLDDYSSSSK RLDYSSKRND YSSSSGSKRG AVDDYTAVPT KRSNDYSASS SSKRDDYKRD 240
241 EVRHLPLSGT VGGGSSSSYL HKNNTAGGGA GSYVHKNNTS GTGGRYNDSD RSNTSSYRRD 300
301 DSHSLGNKRY DNSSGGGGAY GSSSN
|
| Detection Method: | |
| Confidence: | 8.39794 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [564-666] |
1 11 21 31 41 51
| | | | | |
1 SVNIWAPSSG GSSSHLGSGG GGGNQIKSYG NNGMSSNMHS TNSWQKSAPV DDNGWRQVPA 60
61 RFDRGYNERS TGYQGQSGGG GAGGMYGASR PAQDRYSGPV SRY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
