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View Structure Prediction Details

Protein: kal-1-PA
Organism: Drosophila melanogaster
Length: 525 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for kal-1-PA.

Description E-value Query
Range
Subject
Range
gi|76611527 - gi|76611527|ref|XP_886086.1| PREDICTED: similar to ephrin receptor EphB2 isoform 1 precursor isoform...
335.0 [0..6] [432..162]

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Predicted Domain #1
Region A:
Residues: [1-525]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSMQVALLA LLVLGQLFPS AVANGSSSYS STSTSASNQL QRQKLAHWFR DSNDVKDKIL  60
   61 ELQCLAKCGS NPTTKAGREQ CLNKCIQELL LGPRAGSCPK IGRQSRARLS CLDNCQYDHE 120
  121 CPEVQKCCPS SCGPMCVEPL GVRNNTQLPP IPKILYFRRS RGHAVDLKIE SSLLVYYFHV 180
  181 EVRSHIGRHF AARKLGPWQW QKVEKTMEEN IGHSKHTYIF FHMRPGRWYE VRVAAVNAYG 240
  241 FRGYSEPSDP FPSTGNPKPP KSPNDSKIIG KQFDGRYMTL KLVWCPSKSN LPVEKYKITW 300
  301 SLYVNSAKAS MITNSSYVKD THQFEIKELL PNSSYYIQVQ AISYLGSRRL KSEQWSMLFN 360
  361 TTLQPLEPIT PLQCSGNGNR RRHHHTSSSM SSERATTSEP VALNEVSPTI TNRTSAAATY 420
  421 EVGFRLNRKF GMIVQILGFQ PHKEKVYELC PQETNCEQRE FRAIRAKKDP LEFSKLKYNT 480
  481 TYVLRIPRSS PNSVLDDSRN VFTFTTPKCE NFRKRFPKLQ IKCSD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 34.0
Match: 1zlgA
Description: No description for 1zlgA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle