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View Structure Prediction Details

Protein: CG4408-PA
Organism: Drosophila melanogaster
Length: 479 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG4408-PA.

Description E-value Query
Range
Subject
Range
FBpp0308683 - type=protein; loc=3R:complement(19187857..19189260); ID=FBpp0308683; name=CG4408-PB; parent=FBgn0039...
388.0 [0..13] [479..1]

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Predicted Domain #1
Region A:
Residues: [1-479]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYACQSALQE NEMEIFYTDF KLRRIKMLPK GGTPKTWLLL LLVSSVCVIQ ESKASSFCTK  60
   61 ADQCALDEEI KTAADSVQAR YDHTRIYQVE LASEEHVRLF QALEQASDSC SFMGHARQPG 120
  121 QKLTIMVTGA KVADFDDLVH SYNVTHRVLN YNFQALIDAN YLEVAPEDTK PEEFDWKRYH 180
  181 PLESINAWLK KLAETHPEVL LVELGVSAQG RPILGVQIAF DNENRTTVFV ESGIHAREWI 240
  241 APATATYIID QLVNSKDSAV QALARSQRWY IFPTVNPDGY QYTFKGDRMW RKNRALFGIC 300
  301 RGVDLNRNFP FHWNVTGASG DPCRYDYSGP SAASEVETQR MIEFIRHRVE SERIRTFISL 360
  361 HSYSQMIMFP YGHSAERVDN YHDLTDIGKL AANKIKDVSG RIYKSGSIYE TIYPSSGGSK 420
  421 DWAHGQLKIP ITFSYELRGP ADSEDLFILS AKEIEPTAAE AFASIQTIVQ EAGKRGYYQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 100.0
Match: 2boaA
Description: Human procarboxypeptidase A4.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle