Protein: | ETHR-PB |
Organism: | Drosophila melanogaster |
Length: | 461 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ETHR-PB.
Description | E-value | Query Range |
Subject Range |
|
250.0 | [0..5] | [332..20] |
Region A: Residues: [1-355] |
1 11 21 31 41 51 | | | | | | 1 MLPQIPSYIR TTAMFFCIVI MLLGVVGNVM VPIVIVKTKD MRNSTNIFLT NLSIADLLVL 60 61 LVCTPTVLVE VNTRPETWVL GHEMCKAVPF VELTVAHASV LTILAISFER YYAICEPLKA 120 121 GYVCTKGRAI LICVLAWGIA ALFTSPIIAI STYSVEPYGD GTDAPVCTTA ADGFWSIFYF 180 181 VGCITVFFFL PFGILVLLYA AIAYKLLRPN NAFHRPTSPQ PQQPSGGATS GSSQVPSTKG 240 241 NSHQQSNGMR KHRKQVIFML VAVVSSFFVC LLPFRAFTLW VILASAEDVE GLGIAGYYNL 300 301 LYFSRFMLYL NSAMNPILYN LMSSKFRSGF WRLLLTCLGQ RPHHHHRHHY HQRQH |
Detection Method: | |
Confidence: | 45.154902 |
Match: | 1f88A |
Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [356-461] |
1 11 21 31 41 51 | | | | | | 1 PTAGGSGRNA STRQEQDAEE GAALAGTTSA RHPRRTLRRE ATFLINSIST SSGTDRTTSS 60 61 SAWRSNSLSI SGLSERERGI LGAAIIGTTA ATVTTACLQE RRASKI |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.