| Protein: | CG5466-PA |
| Organism: | Drosophila melanogaster |
| Length: | 594 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG5466-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
407.0 | [0..17] | [566..1] |
|
Region A: Residues: [1-288] |
1 11 21 31 41 51
| | | | | |
1 MNNLEHSKHF YPDNYKLDLS ETMKAALSKG PGGGAGGGGV AGGDMLPQPN AGMPGVGYVT 60
61 EKLYMLLQLY LQNKGWNPSA ELLQCFSDLK DNAMLPSAAY LQVLANRLTL DSQGRLILRD 120
121 NGKIVLPFEH FANAVMLKHM SGPHGLHLSV DATVRAVIES YTIGRDQFGM EKEFIIEVVQ 180
181 SCPSPACRYY KNHMGISPMP FMEQQYPGVN TPEFLQRLAH LPPGGAAGSG PGGSAAGSTS 240
241 SVASSSSSAN VEIDLSKSTG AKVPQVPVPP QLQHLTKQQQ STLQTQLS
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [289-484] |
1 11 21 31 41 51
| | | | | |
1 QISAAAAHHQ QQQQQQQQQQ QQQQQQQQQA AAKHQQQLTA ALIQQQNRVL AQQNLEKLSN 60
61 HLSPLEKQRV FAQLDPKHFD PMAVAAAAAN LQIQGLMQSQ AVAAAVAANQ QTPAATTTSA 120
121 AGGAAAGPQA HHGHHPLPPP SQSPHSSSSS SSHSSLDQIT HKNVADSLRS NLDSIESNKD 180
181 LLALHNGAWA TGDANR
|
| Detection Method: | |
| Confidence: | 7.69897 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [485-594] |
1 11 21 31 41 51
| | | | | |
1 MDHLAVGQDK IVRIFAELMR NMSRMKTYIR PSMCKPYGKQ SESLQKTLMD TIQIVQTLRN 60
61 CLPAPHIPVS SWKSESEGNV GSGVSAGVGV GVPAGLNLGA ALGLPSGNMH
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
