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View Structure Prediction Details

Protein: CG6790-PA
Organism: Drosophila melanogaster
Length: 897 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG6790-PA.

Description E-value Query
Range
Subject
Range
gi|115387829, gi... - gi|115387829|ref|XP_001211420.1| hypothetical protein ATEG_02242 [Aspergillus terreus NIH2624], gi|1...
531.0 [0..37] [875..3]

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Predicted Domain #1
Region A:
Residues: [1-97]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLALLQTFL WCFFSVVVNV SFVLYRRLTY RLVGKVQVLM ELWKSKVVLV HLLLLICIMR  60
   61 IFYQSGPLSQ LEPQKTLLDM GVPPAADRLV VFLLEGL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 34.30103
Match: 1o99A
Description: 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain; 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, catalytic domain
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [98-428]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RADTLFSDNC SGAVYIRDII LRQGLVGISK TSVPTLTRSA EVALFAGFNP MPSILPTSNF  60
   61 DTIFNRTLAF DKGAFLRFSH LSDLRRRLTK RACLEKLWYA NKLVMLVNLA EVGGASPLDI 120
  121 GFQMKLHNTQ RNIRDAYELI EATFNDSKTA YLYTSAHGLT YFGSHGGGSD EEREAPFLLW 180
  181 GAGVKHVTEN ITSDFVLNNG VGMQLHKLDQ IQLAPLMSAL IGLPPPVNNL AILPQGYMKV 240
  241 SREYARKSVH LNALQLLTQA KAIIRLHERG VFHKWLPKDK DLDLQQIAYY QNQMDHLLDM 300
  301 GWRSKALETS TLAIKVALKS LKFYHNYYHI P

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.69897
Match: 2qzuA
Description: No description for 2qzuA was found.

Predicted Domain #3
Region A:
Residues: [429-700]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LVVTTVLALL GWQFYQLVKL SQNVMAPHYM RRGYLTWCTI FLASLGLLLG EMVFLQWAPF  60
   61 MTVICLVVPF GVWCMTLAAL PQNGGWIFEP LKHLRWIVGP AAVMIASIYC NCPLSLAYIL 120
  121 CVGFYNRRGW LHPSPKFLAW LALVLLLGGF LWSQKGMQIL MTTNYRVVLQ AISMLVVIVR 180
  181 PCVLNENHKW KVWVINGGIL FVAAIGIFLK EMGKPVPLYL FAANWAYLIY AFASVPCSSR 240
  241 TTPQSRLELI RFNLLTLHVL LSDSYVSLFA QG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [701-897]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LIIEYQMGLE VHEKFKEADE DVKILTSSKH LQMCYRFAVS ILLYFYASLF GTGHWVGGFT  60
   61 YLANSARLFL PDSSSGLVPL LVLIHLLIPS IVIMASVVAL SSFGRQQIRT IFSSLMLICN 120
  121 AVVLFFVVFV PHNAYWPMAH PSVVHALLAQ LTVILILACE SIVTIFFRRL NMNRCSDWRQ 180
  181 EADEFESSYP PITTTAV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle