| Protein: | Rlc1-PA |
| Organism: | Drosophila melanogaster |
| Length: | 227 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Rlc1-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
309.0 | [0..1] | [221..1] |
|
Region A: Residues: [1-163] |
1 11 21 31 41 51
| | | | | |
1 MSSALIKCLN LAKTVGNATV RSFLAAPKQP WQSCSAAALQ TPHVQMPMQM HTSAVRRDLM 60
61 EFFDDKKNWS ENEVKVGRAW RTEELRIKSN KELHQLWFVL LKERNMLLTM EHECNDKMEV 120
121 FPSPERIDKV KISMENLETV VRERNKAYHL LETGETGERP QKA
|
| Detection Method: |  |
| Confidence: | 1.11 |
| Match: | 1p85W |
| Description: | 70S ribosome functional complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| structural constituent of ribosome | 5.61697803233575 | bayes_pls_golite062009 |
| structural molecule activity | 5.3736463631302 | bayes_pls_golite062009 |
|
Region A: Residues: [164-227] |
1 11 21 31 41 51
| | | | | |
1 VKNAFGLQVS YKACEHALPP FMNLKWIKSR NIGYGGRAVN RFLLKYREKL YNAKRKAKKY 60
61 VALS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.664 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.568 | N/A | N/A | a.5.3 | N-terminal domain of phosphatidylinositol transfer protein sec14p |
| View | Download | 0.535 | N/A | N/A | a.60.2 | RuvA domain 2-like |
| View | Download | 0.534 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.504 | N/A | N/A | a.5.2 | UBA-like |
