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View Structure Prediction Details

Protein: Obp85a-PA
Organism: Drosophila melanogaster
Length: 172 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Obp85a-PA.

Description E-value Query
Range
Subject
Range
gi|33355873, gi|... - gi|40019409|emb|CAF01998.1| putative odorant-binding protein OBP3788 [Anopheles gambiae], gi|3335587...
gi|55245600, gi|... - gi|58378570|ref|XP_308533.2| AGAP007286-PA [Anopheles gambiae str. PEST], gi|55245600|gb|EAA04333.2|...
140.0 [0..2] [163..42]

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Predicted Domain #1
Region A:
Residues: [1-172]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPGSVVFSM FLTRPSLDKG NSECRKSLNL PAHRKFNFAE LYTINMCIEE CNFIGCGYIE  60
   61 IDPPFRLDLA NIRTNLQTIA PQPQNESIPF LVDAYRKCEL FRSSHGRRFT LHLPDIEFIE 120
  121 EPCNPFALQI TICVRIHAMQ KCPSEFYVDS DECRLAREYF TQCVGDIETN LA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.57
Match: 1ow4A
Description: Crystal structure of a pheromone binding protein from the cockroach Leucophaea maderae in complex with the fluorescent reporter ANS (1-anilinonaphtalene-8-sulfonic acid),
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
odorant binding 4.34740138836018 bayes_pls_golite062009
pheromone binding 2.50061185527994 bayes_pls_golite062009
binding 1.71868583149917 bayes_pls_golite062009
phenylalkylamine binding 1.10044668642283 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle