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View Structure Prediction Details

Protein: CG1090-PB
Organism: Drosophila melanogaster
Length: 642 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG1090-PB.

Description E-value Query
Range
Subject
Range
gi|109111430 - gi|109111430|ref|XP_001108699.1| PREDICTED: solute carrier family 24 (sodium/potassium/calcium excha...
416.0 [0..25] [641..42]

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Predicted Domain #1
Region A:
Residues: [1-284]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVRSRSRRA RMWNMGLLFL IYYCVSIYSA KGDTKDGQVL PLDVGALAED AGDAEANGED  60
   61 TPERNSESSV LDTTLAFEPQ ASTQSTPIHG AVPTWRPKRD NCTPPAIEQF PQPLMNKWAR 120
  121 QHGGLILHIL VAVFTFFGLA IVCDEYFVAS LDRLCEELKL SPDVAGATFM AAGSSAPELA 180
  181 TVVIGVFFAK DDIGISGVIG SAVFNIMFVI SVCALCSGTV CQLNWWPLVR DCFFYCVSIL 240
  241 VMLIIIFNDV ISCFESVVML LCYVGYCVAL HFNTELERWA LGLN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 34.79588
Match: PF01699.15
Description: No description for PF01699.15 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [285-439]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LPFKLPSKEE QSALVTYKNV PEGSYTQESV GQTQGQKATD DSETRSAKPQ SDYQDYSDPN  60
   61 PTWDPNAAWG DESQPNPVAN PPPVDDWGMG HSGQENMGYH ADQPESVVTG DGPPAAVKSG 120
  121 GQVVSTQATS AGGNDYYKST DKQREPRRDP LLRPM

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [440-642]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EGGLPALVSW YVVYPIHFLC KKTMPDCRQE QYRNWYPFTF LMSMVWISFY SYFMVWMITV  60
   61 IGSTLAIPDT VMGLTFVAAG VSVPDALSSI AVIKEGFGDM AVSNAIGSNV FDILVCLGLP 120
  121 WFIQTAIIKP GSHVNVISKG LAYSTLSLFS TVVFLILSTH LNGWKLDKRL GIILMVWYLF 180
  181 FITLASLYEL NVFGYMNPPE CPS

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 38.267606
Match: PF01699.15
Description: No description for PF01699.15 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle