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View Structure Prediction Details

Protein: CG33253-PA
Organism: Drosophila melanogaster
Length: 367 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG33253-PA.

Description E-value Query
Range
Subject
Range
gi|88858906, gi|... - gi|88858906|ref|ZP_01133547.1| HflK complex with HflC [Pseudoalteromonas tunicata D2], gi|88819132|g...
285.0 [0..1] [364..3]

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Predicted Domain #1
Region A:
Residues: [1-125]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHPASPHQHR ARLHVGSPGS GGIQASSSTE TFPLTPQHQS SQHAVHIPPP PSLPYQGLKT  60
   61 SENDDMGCVE ILATVVSVLI MVLTFPISVF ICFKVVSEYE RAVIFRMGRL RSGGARGPGV 120
  121 FFVLP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [126-245]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CVDDYYPVDL RTVSFDVPPQ EVLSKDSVTV TVDAVVYYRI SDPLKAVIQV YNYSHSTSLL  60
   61 AATTLRNVLG TRNLSELLTE RETISHTMQM SLDEATDPWG VKVERVEIKD VSLPTALQRA 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 12.154902
Match: 1winA
Description: Solution Structure of the Band 7 Domain of the mouse Flotillin 2 Protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.67282155252301 bayes_pls_golite062009
structural molecule activity 0.834496144484266 bayes_pls_golite062009
protein binding 0.769979871341236 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [246-367]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAEAEAARE ARAKVIAAEG EMKSSRALRE ASEIISASPS ALQLRYLQTL SSISTEKNST  60
   61 IIFPLPMELL TPFLNTQAHS QQLQLQHQQQ LQQQQQQHQH QQQQHPAAPG TPLHRHPHQH 120
  121 HQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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