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View Structure Prediction Details

Protein: CG32549-PA
Organism: Drosophila melanogaster
Length: 715 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG32549-PA.

Description E-value Query
Range
Subject
Range
CG32549-PF, CG32... - This gene is referred to in FlyBase by the symbol Dmel\CG32549 (CG32549, FBgn0052549). It is a prote...
917.0 [0..104] [715..1]

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Predicted Domain #1
Region A:
Residues: [1-140]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFKLAMRNL RRLTNTLQYH RQLTSRSETT DTFRYPNHIA QVAIVNDSRR LSLKSGEIPK  60
   61 HGQGSQTAPS RIYPIHIGAP NCQRSRRNKG NRRLSCSYAS LGRMQATPSE DAQPQDPLKS 120
  121 FERDFCDLPP YQCEMSDSAP 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [141-715]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NTPGPCSTSA LPKKYYRYAA HRVFVNRSLH LENIKYYGFD MDYTLAEYKS PQYEQLGFNL  60
   61 VKERLVFMGY PKEILQFEYD PTFPVRGLWF DTLYGNLLKV DAYGNILVCV HGFEFIKHHQ 120
  121 VYELYPNKFL KLDESRVYVL NTLFNLPETY LLACLVDFLT NSSDFVRVER GIKAGDLLFT 180
  181 YKSIFQDVRR AVDWVHSDGD LKRRTTQNMA HYVKKDERLP TVLSRIRESG AKLFMLTNSD 240
  241 YTYTNEIMTY LFDFPHGATP DEPHRDWKTY FDVIVVDARK PLFFDEGTVL RQVDTKTGSL 300
  301 KIGTHVGPLQ PGQVYSGGSC ELFTKFINAK GKDVLYVGDH IFGDILKSKK IRGWRTFLIV 360
  361 PELVRELHVW TDECQLFAEL QNLDIKLGDL YRDLDSSAKV KPDISQLRTC IRDVTHKMDM 420
  421 SYGMMGSLFR SGSRQTFFSS QVVRYADVYA ATLLNLIYYP FSYMFRAPAM LLPHESTVAH 480
  481 DQAHQPPPPL GPVPVPATGA ASVAASPDEP ARILAGTAEH VKDPKDLHRA SSIVHTRPST 540
  541 PTVVTHTHDE DYSEEEETPS GAESSTEAVR DASED

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 2j2cA
Description: No description for 2j2cA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle