| Protein: | Muc11A-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1040 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Muc11A-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
386.0 | [0..2] | [1037..434] |
|
Region A: Residues: [1-180] |
1 11 21 31 41 51
| | | | | |
1 MTTNRSTRLL VLLVLTALVA SHQAHAAAVG LKCGGKSAVC VGPLSYQQCV DDLTTGPVVP 60
61 CALNTRCVTD GLEICVPVKS AAEAPTAAVA KMVTITDSPV VSESAPLVDS TNSGSGVEIS 120
121 TEGAPASAVP TKPSIPVETT QAPVETTQIP LETTQVAVET TQIPLETTQA SGETTTAAIE 180
181
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [181-321] |
1 11 21 31 41 51
| | | | | |
1 ETTTGSEAPL EPESTVPSDT TPVDSTLAPG WEGTYPTIEP NTPAEDPNAP AGTTLAPGEV 60
61 DPNSPIDPNS PLDPNAPEES TNEPGLVDPT LPADTTTAPD SPVEGSSAAP GTPADVTTAA 120
121 PGAPADGSSA APGSPADGSS A
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [322-445] |
1 11 21 31 41 51
| | | | | |
1 APGSPADVTT AAPGAPADGS SAAPGAPADG SSAAPGSPAD VTTAAPGAPA DGSSAAPGSP 60
61 AEGSSAAPGA PADVTTAAPG APADGSSAAP GAPADGSSAA PGSPADVTTA APGAPADGSS 120
121 AAPG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [446-592] |
1 11 21 31 41 51
| | | | | |
1 SPAEGSSAAP GAPADVTTAA PADGSSAAPG SPADVTTAAP GAPADGSSAA PGAPADGSSA 60
61 APGSPADVTT AAPGAPADGS SAAPGSPADV TTAAPGAPAD GSSAAPADGS SAAPGSPADV 120
121 TTAAPGAPAD GSSAAPGSPA EGSPPAG
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [593-686] |
1 11 21 31 41 51
| | | | | |
1 GSPAGSNVPA GGDPADSNVP AGGAPADSNV PAGGAPADSN VPAGGAPADS NVPAGGAPAD 60
61 ANVPAGGAPA DSNVPGGGAP ADANVPAGGA PADS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [687-865] |
1 11 21 31 41 51
| | | | | |
1 NVPAGGAPAG SNVPAGGAPA DSNVPAGGAP ADSNVPAGGA PAGSNVPAGS SPGSSVLGPN 60
61 PPAGSVVPSI PVLPGGAGSW PWHPRPNIPI VPPTWRPLLP GQNGSGAPGS GLINGIVNPP 120
121 QRPHPFWPNW QSWVNSWRPT KPVPSTEAPV QPQNPQQPQN PQQPGNSNPE TAESVEQAA
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [866-1040] |
1 11 21 31 41 51
| | | | | |
1 PVPPANVPAS NENASVEDSN KASSEKSKDK PKSGEDQSKE QEQKKPSSEE KEKDSKEKND 60
61 KDSKEKKDND SKDKKDKSKE EKDNESQKDN DGDDEPSSKE KKQYVKDLIK KLKKGDECDE 120
121 DDVYPDVRDC RKYYRCEVKK SGKHKFAHLR CDKKERFDWL TQSCVPKDEA RCLEK
|
| Detection Method: | |
| Confidence: | 2.97 |
| Match: | 1dv4A |
| Description: | 30S subunit |
Matching Structure (courtesy of the PDB): |
|
