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View Structure Prediction Details

Protein: CG4752-PA
Organism: Drosophila melanogaster
Length: 1294 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG4752-PA.

Description E-value Query
Range
Subject
Range
gi|54636196, gi|... - gi|54636196|gb|EAL25599.1| GA18405-PA [Drosophila pseudoobscura], gi|125809187|ref|XP_001361023.1| G...
1579.0 [0..2] [1294..1]

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Predicted Domain #1
Region A:
Residues: [1-569]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGTKYCFAI DRGGTFTDVL CICPNGKVRT MKLLSEDPER YSDAPREGIR RILKEETGED  60
   61 LAASGLVDTS KIGWVRMGTT VATNALLERK GDPVVLVVNS GFRDLLYIGN QARPKIFDLN 120
  121 IRKPANLYKS VVEVDCRIVP KQADRCELNH SWKELEGVAG TKYLEVRPVD EVAVRQALSD 180
  181 ARDQGVSSVS VVLAHSYACP EHELRVGAIA RELGFSHVTL SHQAMPMCRV VARGYTACAE 240
  241 AYLTPHVDRY LASFKSGFDK QLEGVDVLFM QSDGGLTNME NFRGARAILS GPAGGVVGYA 300
  301 LTGARETELP LIGFDMGGTS TDVSRYAGTY EHVIESTTAG VTIQAPQLDI NTVAAGGGSR 360
  361 LFFRSGIFVV GPESAGSHPG PACYKKGGPL TVTDANLILG RILPQYFPKI FGPQENEPLD 420
  421 HEIARSKFVE LQAEINNYLK SSGDNRVLSV EDVALGFIRV ANETMCRPIR ALTQSRGLDT 480
  481 ANHVLSCFGG AGGQHACSIA RNLGIAKVVV HKYAGILSAY GMALADVVQE FQEPNGLEFS 540
  541 DANAQQLKER LDALSKQCQD KLSEQGFKR

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.962
Match: 2p3rA
Description: No description for 2p3rA was found.

Predicted Domain #2
Region A:
Residues: [570-728]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IELEPFLHLR YEGTDGALMV APSTGKQSSD SNPLLAAYGD FHATFLERYR TEFGFVLQNR  60
   61 RIIVDDIRIR GLGKNETPPE SKVQAAAEAK PPAEANTRLY FDQGAFDSPI YLTKNLLAGH 120
  121 RITGPAVLID QLSTIVVEPE CGIQVTQFGD LIMDVKTGG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [729-833]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KHGINADLDP VHLSIFSHRF MSIAEQMGRV LQRTSISTNI KERLDFSCAL FGPDGGLVSN  60
   61 APHIPVHLGA MQETVQYQLR VRGETLKNGD VILANHPSAG GSHLP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [834-958]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DLTVITPVFY ETHPRPVFFV ASRGHHADIG GITPGSMPPH STSLAQEGAA FKSFLIVENG  60
   61 LFQEQQIIEQ LTTPTAAKGA VGTRNLSDNL SDLKAQIAAN HKGIQLVAEL IGSYGLDVVQ 120
  121 AYMSH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [959-1099]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IQKNAELAVR DMLRQIGRDT LERTGSTVLE AKEFMDDGSP IALKVTIDAE QGSALCDFTG  60
   61 SGVEVWGNCN APRAITLSAL IYCLRCMVGH DVPLNQGCLA PIQVIIPKNS ILDPSEGAAV 120
  121 VGGNVQTSQR IVDTVLKAFG V

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [1100-1167]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CAASQGCMNN ITIGDESWGY YETVAGGAGA GPGWHGAGGV HTHMTNTRIT DPEILELRYP  60
   61 MILKRFCL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [1168-1294]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RTDGSGGRGQ FHGGEGVERD LLFRKPVTLS VLTERRTLQP YGLAGGESGK SGRNLVVKRD  60
   61 GRVIALAGKT CIDVEAGDTF AMKTPGGGGY GPIEDFSKSG ESLNQETSKR YVERGTVFNY 120
  121 LQCQESA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle