| Protein: | AP-1gamma-PB |
| Organism: | Drosophila melanogaster |
| Length: | 976 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AP-1gamma-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
661.0 | [0..1] | [976..1] |
|
Region A: Residues: [1-691] |
1 11 21 31 41 51
| | | | | |
1 MYPYYEQDWS VLPPENNRRF NPAFNMATIR QAFTEAVERV RMPTPTRLRD LIRQIRAART 60
61 AAEERAVVNK ECAYIRSTFR EEDSVWRCRN IAKLLYIHML GYPAHFGQLE CLKLTASTRF 120
121 TDKRIGYLGA MLLLDERQDV HLLITNCLKN DLNSSTQFVV GLALCTLGAI ASPEMARDLA 180
181 SEVERLMKSP NTYIRKKATL CAFRVIRRVP ELMEIFLPAT RSLLSEKNHG ILITGVTLIT 240
241 EMCENSSDTL MHFKKIVPNL VRILKNLILG GYSPEHDVSG VSDPFLQVKI LRLLRILGHN 300
301 DPDASEAMND ILAQVATNTE TSKNVGNTIL YETVLSIMDI RSEGGLRVLA VNILGRFLLN 360
361 SDKNIRYVAL NTLLRTVHAD TSAVQRHRTT ILECLKDPDV SIRRRAMELS FALINAQNIR 420
421 TMTKELLLFL EKADAEFKAQ CSSGMILAAE RYSPTTRWHL DTQLSVLIAA GNYVRDDVVS 480
481 STIQLVSSSP VPEQTYITNR FWESLQVANH CEDKQPLLQV AVWAIGEYGD LFMYGANEDE 540
541 FERPTESDLI AVYYKFLTSA QVSTTSKQYA LVSLAKLSTR LQQCVEEIQA LITSFGSHLN 600
601 VDLQQRGVEF TQLFGHYKHL RPPLLEKMPA MQISRISSQN GESGGGSFDD NSPDVIENGV 660
661 EGGGGGGHSL IESNMNTLGD NTNILLDLLG S
|
| Detection Method: |  |
| Confidence: | 152.0 |
| Match: | 1w63A |
| Description: | AP1 clathrin adaptor core |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [692-803] |
1 11 21 31 41 51
| | | | | |
1 TDLSAGGAGD LVAATDLSNA VHKKNSRNAN DVVAPVSNNQ DLLDLLDLDL SAPSSTTTGA 60
61 PAGGGGGGGI VALVGDNNQS SAANMNNMLG GLDLGGFGSG LDSSASIPTN GN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [804-976] |
1 11 21 31 41 51
| | | | | |
1 DLASMLGGLG APPAASPSLA ASAPVGNLID GHAGSLLADL NPTAASNNVV VPPQGPRLTA 60
61 LDKDGLLVQL VSVRGSDCMR IYMTTTNNSD NTLDQYLLQA AVQRSFQLQM LTPSGSVLPP 120
121 GGVITQEMRV VATSNATLRM RLRIQYVLDG QQQVEQTEVS GFPEQQPAPA AAE
|
| Detection Method: | |
| Confidence: | 18.30103 |
| Match: | 1iu1A |
| Description: | Gamma1-adaptin domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.73706375360191 | bayes_pls_golite062009 |
| protein binding | 1.07977592306595 | bayes_pls_golite062009 |
| transporter activity | 0.169557557237959 | bayes_pls_golite062009 |
