| Protein: | AP-1gamma-PD |
| Organism: | Drosophila melanogaster |
| Length: | 982 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AP-1gamma-PD.
| Description | E-value | Query Range |
Subject Range |
|
|
669.0 | [0..1] | [982..1] |
|
Region A: Residues: [1-694] |
1 11 21 31 41 51
| | | | | |
1 MYPYYEQDWS VLPPENNRRF NPAFNMATIR QAFTEAVERV RMPTPTRLRD LIRQIRAART 60
61 AAEERAVVNK ECAYIRSTFR EEDSVWRCRN IAKLLYIHML GYPAHFGQLE CLKLTASTRF 120
121 TDKRIGYLGA MLLLDERQDV HLLITNCLKN DLNSSTQFVV GLALCTLGAI ASPEMARDLA 180
181 SEVERLMKSP NTYIRKKATL CAFRVIRRVP ELMEIFLPAT RSLLSEKNHG ILITGVTLIT 240
241 EMCENSSDTL MHFKKDSGNR EIVPNLVRIL KNLILGGYSP EHDVSGVSDP FLQVKILRLL 300
301 RILGHNDPDA SEAMNDILAQ VATNTETSKN VGNTILYETV LSIMDIRSEG GLRVLAVNIL 360
361 GRFLLNSDKN IRYVALNTLL RTVHADTSAV QRHRTTILEC LKDPDVSIRR RAMELSFALI 420
421 NAQNIRTMTK ELLLFLEKAD AEFKAQCSSG MILAAERYSP TTRWHLDTQL SVLIAAGNYV 480
481 RDDVVSSTIQ LVSSSPVPEQ TYITNRFWES LQVANHCEDK QPLLQVAVWA IGEYGDLFMY 540
541 GANEDEFERP TESDLIAVYY KFLTSAQVST TSKQYALVSL AKLSTRLQQC VEEIQALITS 600
601 FGSHLNVDLQ QRGVEFTQLF GHYKHLRPPL LEKMPAMQIS RISSQNGESG GGSFDDNSPD 660
661 VIENGVEGGG GGGHSLIESN MNTLGDNTNI LLDL
|
| Detection Method: |  |
| Confidence: | 150.0 |
| Match: | 1w63A |
| Description: | AP1 clathrin adaptor core |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [695-804] |
1 11 21 31 41 51
| | | | | |
1 LGSTDLSAGG AGDLVAATDL SNAVHKKNSR NANDVVAPVS NNQDLLDLLD LDLSAPSSTT 60
61 TGAPAGGGGG GGIVALVGDN NQSSAANMNN MLGGLDLGGF GSGLDSSASI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [805-982] |
1 11 21 31 41 51
| | | | | |
1 PTNGNDLASM LGGLGAPPAA SPSLAASAPV GNLIDGHAGS LLADLNPTAA SNNVVVPPQG 60
61 PRLTALDKDG LLVQLVSVRG SDCMRIYMTT TNNSDNTLDQ YLLQAAVQRS FQLQMLTPSG 120
121 SVLPPGGVIT QEMRVVATSN ATLRMRLRIQ YVLDGQQQVE QTEVSGFPEQ QPAPAAAE
|
| Detection Method: | |
| Confidence: | 20.39794 |
| Match: | 1gyuA |
| Description: | Gamma1-adaptin domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.73706375360191 | bayes_pls_golite062009 |
| protein binding | 1.07977592306595 | bayes_pls_golite062009 |
| transporter activity | 0.169557557237959 | bayes_pls_golite062009 |
