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View Structure Prediction Details

Protein: gi|45554288, gi|...
Organism: Drosophila melanogaster
Length: 231 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|45554288, gi|....

Description E-value Query
Range
Subject
Range
gi|92097565 - gi|92097565|gb|AAI14849.1| SPTBN1 protein [Bos taurus]
214.0 [0..56] [231..101]

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Predicted Domain #1
Region A:
Residues: [1-231]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPQTTTTTT TISNNSNKSN NLINIPRFHK SSSSSEQRTE TKSKDGGATV TTTTTKVTTR  60
   61 TVSGSAASKN ISPLAKFKQL DKQAAAQQAQ KSSPTTSTPT TPGGSAQPLF KFTDPALNAR 120
  121 AATVKDQLLQ WCKHKTQEYE NVQINNFSSS WSDGLAFCAL IHHFLPDAFD YTTLTKQTRR 180
  181 HNFELAFSVA DEKAGIAPLL DVEDMVEMSR PDWKCVFVYV QSIYRRFRNC Q

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 54.0
Match: 1tjtA
Description: X-ray structure of the human alpha-actinin isoform 3 at 2.2A resolution
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle