| Protein: | Vap-33-1-PD |
| Organism: | Drosophila melanogaster |
| Length: | 238 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Vap-33-1-PD.
| Description | E-value | Query Range |
Subject Range |
|
|
225.0 | [0..1] | [238..37] |
|
Region A: Residues: [1-126] |
1 11 21 31 41 51
| | | | | |
1 MTLRNNSALP LVFKIKTTAP KRYCVRPNIG KIIPFRSTQV EICLQPFVYD QQEKNKHKFM 60
61 VQSVLAPMDA DLSDLNKLWK DLEPEQLMDA KLKCVFEMPT AEANAENTSG GGAVGGGTGA 120
121 AGGGSA
|
| Detection Method: |  |
| Confidence: | 33.30103 |
| Match: | 2criA |
| Description: | Solution structure of the MSP domain of mouse VAMP-associated proteinA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [127-238] |
1 11 21 31 41 51
| | | | | |
1 GANTSSASAE ALESKPKLSS EDKFKPSNLL ETSESLDLLS GEIKALRECN IELRRENLHL 60
61 KDQITRFRSS PAVKQVNEPY APVLAEKQIP VFYIAVAIAA AIVSLLLGKF FL
|
| Detection Method: | |
| Confidence: | 1.45 |
| Match: | 1dipA |
| Description: | Delta-sleep-inducing peptide immunoreactive peptide |
Matching Structure (courtesy of the PDB): |
|
