| Protein: | Vap-33-1-PA |
| Organism: | Drosophila melanogaster |
| Length: | 235 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Vap-33-1-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
249.0 | [0..1] | [235..8] |
|
Region A: Residues: [1-132] |
1 11 21 31 41 51
| | | | | |
1 MSKSLFDLPL TIEPEHELRF VGPFTRPVVT IMTLRNNSAL PLVFKIKTTA PKRYCVRPNI 60
61 GKIIPFRSTQ VEICLQPFVY DQQEKNKHKF MVQSVLAPMD ADLSDLNKLW KDLEPEQLMD 120
121 AKLKCVFEMP TA
|
| Detection Method: |  |
| Confidence: | 38.30103 |
| Match: | 2criA |
| Description: | Solution structure of the MSP domain of mouse VAMP-associated proteinA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [133-235] |
1 11 21 31 41 51
| | | | | |
1 EALESKPKLS SEDKFKPSNL LETSESLDLL SGEIKALREC NIELRRENLH LKDQITRFRS 60
61 SPAVKQVNEP YAPVLAEKQI PVFYIAVAIA AAIVSLLLGK FFL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
