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View Structure Prediction Details

Protein: wapl-PB
Organism: Drosophila melanogaster
Length: 1092 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for wapl-PB.

Description E-value Query
Range
Subject
Range
FBpp0310572, wapl-PA - The gene wings apart-like is referred to in FlyBase by the symbol Dmel\wapl (CG3707, FBgn0004655). I...
849.0 [0..1] [1092..650]

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Predicted Domain #1
Region A:
Residues: [1-169]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMMTIDGAGT GAASAVPETP LQEDILAVLR GEVPRLNGNT DPEPTEEEDQ QQQPKRATRG  60
   61 RGRKANNNVD VTPPATETRT RGRAKGADAT TAAISPPTGK RNTRGTRGSR KAEQEVDMEV 120
  121 DETAMTTVPA NEEQLEQATL PPRRGRNAAA RANNNNLASV NNNINKIAA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [170-328]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NLSAKAEASR LAEGGVAGGA ARSYGRKRKN QQVTQVLQQE PVPEEQETPD AEEEQPTPAK  60
   61 IPHTDHREHS PDHDPDPDPD ELSNNSNNSS LQHDGSSSSP PPRDFKFKDK FKRTLTLDTQ 120
  121 GAANAGAGGA AAAAPPESSG EQRGAVKLVI SKKKGSIFK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [329-533]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SRALVPSDQA EQATVAKRHL YKHSWDAALE ANGGGTNSDA SNASASGVGV AGAKDHLHHL  60
   61 AAGKSDGDFG DSPSSNNNGS SSACSSASTL RGDSPALGKI SRLAGKQGVP ATSTSSDAFD 120
  121 LDLEPIAGEL DLERSAAGAS AGGTGATTGG GGATGGGGPV RVDRKTKDYY PVVRNVKTAH 180
  181 QIQEIGEYQE MDDDVEYILD ALQPH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [534-776]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NPPATRCLSA LQLAAKCMMP AFRMHVRAHG VVTKFFKALS DANKDLSLGL CTSAIMYILS  60
   61 QEGLNMDLDR DSLELMINLL EADGVGGSTE TGHPDRAGYD RNKQKVRELC EEIKAQGKGT 120
  121 HLNVDSLTVG TLAMETLLSL TSKRAGEWFK EDLRKLGGLE HIIKTISDFC RPVIACDTEI 180
  181 DWQPTLLDNM QTVARCLRVL ENVTQHNETN QRYMLTSGQG KAVETLCQLY RLCSRQIMLH 240
  241 PSD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [777-926]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGGSNKEHPG VAMRELLVPV LKVLINLTHT FNEAQPSLGA ELLGQRGDVV ETSFRLLLLS  60
   61 ANYIPDQCVF ELSILVLTLL INLCMHTVPN RAALMQAAAP AEYVADNPPA QGSVSALQAL 120
  121 LEYFYKCEEL ARLVEKNTDA FLESNEKGKK 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [927-1092]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KQEEVEETVN NLVQRAGHHM EHTLKGSYAA ILVGNLIADN ELYESVVRRQ LRGNSFKEII  60
   61 GVLEKYHTFM NLTSSLEAAF VAHMKSTKRI IDNFKKRDYI YEHSDEHDNP LPLNLETTAQ 120
  121 VLAVGADASH AATSSTTVGS GSAPSSTSAT GTTRAPRVYK TYSSHR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle