| Protein: | brk-PA |
| Organism: | Drosophila melanogaster |
| Length: | 704 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for brk-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
296.0 | [0..203] | [704..1] |
|
Region A: Residues: [1-85] |
1 11 21 31 41 51
| | | | | |
1 MDSSSEQLNG SGALNFKRPK DSSENATNSH TNNGNSSGSP KMGSRRIFTP HFKLQVLESY 60
61 RNDNDCKGNQ RATARKYNIH RRQIQ
|
| Detection Method: |  |
| Confidence: | 6.06 |
| Match: | 2gloA |
| Description: | No description for 2gloA was found. |
|
Region A: Residues: [86-301] |
1 11 21 31 41 51
| | | | | |
1 KWLQCESNLR SSVANNQQQQ QQQQQQQQQQ QQQQQLLPQQ SVSPTPAVKV FHQLSHPLVH 60
61 QLHHHHAAAV GHHHHHAAHH HAAHHHHAAA AAAAAAAAAA AAAAHHHAAH HLLAANGMVP 120
121 HPLAAHPHLH VPVAMHPQMQ HQKEQQQQQQ QLQQEQQQQD QQQSQQETPA TIATNGSNQG 180
181 SSNVLSAAKI AAVVAAAMAT SNGNPTPTAT IPASSS
|
| Detection Method: | |
| Confidence: | 8.30103 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [302-463] |
1 11 21 31 41 51
| | | | | |
1 SSSNTLPSSN NSSCHNSSSS SNSCNSNQVP IQVPILSGSP GSTSSASHIP HVPFAYHHNL 60
61 HGYLENRLEA VATPAPMDLS LGSSARRQMQ LHEKDPSGVD LTFRKRKVIT SPMQPDKISK 120
121 LEEVIKKEPE TETENEDVEV DVETEQPEEH KLPSKQVKLF KP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [464-589] |
1 11 21 31 41 51
| | | | | |
1 YLLDDDEEQD HHHHHHHHRQ EDLDEGAAEE EQDDEEESRY ADDDEVDSKE AADKKQRRLK 60
61 KKPSAINEQR EPIIWSNHPY PGGCVSPGSS ITSSFQCPTS MQQQQTFPVA GGSPNQQFQD 120
121 NCSSSK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [590-704] |
1 11 21 31 41 51
| | | | | |
1 ATTPLSPFSA PALSPTGFCC PKGSPVSGYE SSSSTYSDSG SNYSLNLQLH AVYNDNLMYM 60
61 QQQQQQQQQQ HHLQHQQHLQ RWLDQESLAT ARTSSVNRPL ILVADTAPTN LTLVA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
