YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|1857602
Organism:	Drosophila melanogaster
Length:	101 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|1857602.

Description	E-value	Query Range	Subject Range
gi\|108881215, gi... - gi\|157135292\|ref\|XP_001656586.1\| pupal cuticle protein 78E, putative [Aedes aegypti], gi\|108881215\|g...	130.0	[0..1]	[99..1]
gi\|119114025, gi... - gi\|119114025\|ref\|XP_318996.3\| ENSANGP00000014758 [Anopheles gambiae str. PEST], gi\|116118218\|gb\|EAA1...	130.0	[0..6]	[100..10]
gi\|125808726, gi... - gi\|54636022\|gb\|EAL25425.1\| GA15602-PA [Drosophila pseudoobscura], gi\|125808726\|ref\|XP_001360850.1\| G...	130.0	[0..3]	[99..60]
gi\|91083447 - gi\|91083447\|ref\|XP_970381.1\| PREDICTED: similar to cuticle protein 1 [Tribolium castaneum]	128.0	[0..1]	[101..1]
gi\|21627378, gi\|... - gi\|24653001\|ref\|NP_725147.1\| CG30045-PA [Drosophila melanogaster], gi\|21627378\|gb\|AAM68675.1\| CG3004...	126.0	[0..17]	[99..176]

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Predicted Domain #1

Region A:
Residues: [1-101]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVVGSIALL LALASARPQN DVEVLEYESE NTGLGGYKFS YKLSDGTSRT EEGVVNNAGT  60
   61 DNESISIRGS VTWVAPDGQT YTINFVADEN GFQPEGAHLP K

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	29.327902
Match:	PF00379.14
Description:	No description for PF00379.14 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.962	N/A	N/A	d.17.2	Copper amine oxidase, domains 1 and 2

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits