YRC Public Data Repository - Protein Structure Prediction

Protein:	ANF_MOUSE
Organism:	Mus musculus
Length:	152 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ANF_MOUSE.

Description	E-value	Query Range	Subject Range
gi\|18254389 - gi\|18254389\|gb\|AAL66741.1\|AF460238_1 atrial natriuretic peptide hormone [Notomys alexis]	210.0	[0..1]	[152..1]
ANF_RAT - Natriuretic peptides A OS=Rattus norvegicus GN=Nppa PE=1 SV=1	209.0	[0..1]	[152..1]
ANF_MOUSE - Natriuretic peptides A OS=Mus musculus GN=Nppa PE=2 SV=1	204.0	[0..1]	[152..1]
gi\|47847117 - gi\|47847117\|dbj\|BAD21299.1\| atrial natriuretic peptide [Camelus dromedarius]	203.0	[0..1]	[152..1]
ANF_FELCA - Natriuretic peptides A OS=Felis catus GN=NPPA PE=3 SV=1	200.0	[0..1]	[152..1]
gi\|108246 - pir\|\|S13107 atrial natriuretic peptide precursor - pig ANF_PIG - Natriuretic peptides A OS=Sus scrofa GN=NPPA PE=1 SV=1	198.0	[0..1]	[150..1]
ANF_BOVIN - Natriuretic peptides A OS=Bos taurus GN=NPPA PE=1 SV=2	196.0	[0..1]	[152..1]
ANF_RABIT - Natriuretic peptides A OS=Oryctolagus cuniculus GN=NPPA PE=2 SV=1	196.0	[0..1]	[152..1]
gi\|6687599, gi\|6... - gi\|6687599\|emb\|CAB65023.1\| atrial natriuretic peptide [Balaenoptera physalus], gi\|6686952\|emb\|CAB647...	195.0	[0..1]	[152..1]

Back

Predicted Domain #1

Region A:
Residues: [1-152]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSFSITLGF FLVLAFWLPG HIGANPVYSA VSNTDLMDFK NLLDHLEEKM PVEDEVMPPQ  60
   61 ALSEQTEEAG AALSSLPEVP PWTGEVNPPL RDGSALGRSP WDPSDRSALL KSKLRALLAG 120
  121 PRSLRRSSCF GGRIDRIGAQ SGLGCNSFRY RR

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	48.552842
Match:	PF00212.9
Description:	No description for PF00212.9 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.257	N/A	N/A	a.118.8	TPR-like

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits