YRC Public Data Repository - Protein Structure Prediction

Protein:	ISCA2_MOUSE
Organism:	Mus musculus
Length:	154 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ISCA2_MOUSE.

Description	E-value	Query Range	Subject Range
gi\|12833285 - gi\|12833285\|dbj\|BAB22467.1\| unnamed protein product [Mus musculus]	200.0	[0..1]	[154..10]
gi\|62651064, gi\|... - gi\|62651064\|ref\|XP_576075.1\| PREDICTED: similar to HESB like domain containing 1 [Rattus norvegicus]...	199.0	[0..1]	[154..1]
gi\|114653906 - gi\|114653906\|ref\|XP_001143075.1\| PREDICTED: hypothetical protein [Pan troglodytes]	193.0	[0..1]	[154..42]
gi\|28207853 - gi\|28207853\|emb\|CAD62580.1\| unnamed protein product [Homo sapiens]	193.0	[0..1]	[154..5]
gi\|109084313 - gi\|109084313\|ref\|XP_001094302.1\| PREDICTED: similar to HESB like domain containing 1 [Macaca mulatta...	192.0	[0..1]	[154..1]
ISCA2_PONPY - Iron-sulfur cluster assembly 2 homolog, mitochondrial precursor - Pongo pygmaeus (Orangutan) ISCA2_PONAB - Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Pongo abelii GN=ISCA2 PE=2 SV=1	191.0	[0..1]	[154..1]
ISCA2_BOVIN - Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Bos taurus GN=ISCA2 PE=2 SV=1	172.0	[0..1]	[154..1]

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Predicted Domain #1

Region A:
Residues: [1-63]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASRALSLT AEAVRAVIPR RSGRLLAVFP RLLTRWETTS SIPEAGEGQI RLTDSCVQRL  60
   61 LEI

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [64-154]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TEGSEFLRLQ VEGGGCSGFQ YKFSLDTVIN PDDRVFEQGG ARVVVDSDSL AFVKGAQVDF  60
   61 SQELIRSSFQ VLNNPQAQQG CSCGSSFSVK V

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	38.0
Match:	2apnA
Description:	No description for 2apnA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits