| Protein: | RM47_MOUSE |
| Organism: | Mus musculus |
| Length: | 252 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RM47_MOUSE.
| Description | E-value | Query Range |
Subject Range |
|
|
375.0 | [0..1] | [252..1] |
|
|
372.0 | [0..1] | [252..1] |
|
|
369.0 | [0..1] | [252..1] |
|
|
366.0 | [0..1] | [252..1] |
|
|
364.0 | [0..1] | [252..1] |
|
|
338.0 | [0..1] | [250..1] |
|
Region A: Residues: [1-82] |
1 11 21 31 41 51
| | | | | |
1 MAATSLVGIC RRASAFLKAA CSLVNPKDAA HSGCRSSLSL LHKNTPHVTS FLQCKLLHTT 60
61 LSRKGLEEFF DDPKNWGEEK VK
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [83-165] |
1 11 21 31 41 51
| | | | | |
1 SGASWTCQQL RNKSNEDLHK LWYVLLKERN MLLTLEQEAK RQRLPMPSPE RLEKVVDSMD 60
61 NVDKVVQERE DALRLLQTGQ EKP
|
| Detection Method: | |
| Confidence: | 1.18 |
| Match: | 1p85W |
| Description: | 70S ribosome functional complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| structural constituent of ribosome | 5.72889017978873 | bayes_pls_golite062009 |
| structural molecule activity | 5.46643267143443 | bayes_pls_golite062009 |
|
Region A: Residues: [166-252] |
1 11 21 31 41 51
| | | | | |
1 RPGAWRRDIF GRIVWHKFKQ WPIPWYLNKR YNRRRFFAMP YVDRFIRLRI EKHARIEARK 60
61 RSLQKKKEKI LHAKFPHLSQ ERKSSSV
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.489 | 0.006 | structural constituent of ribosome | a.85.1 | Hemocyanin, N-terminal domain |
| View | Download | 0.341 | 0.004 | structural constituent of ribosome | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.431 | 0.002 | structural constituent of ribosome | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.326 | N/A | N/A | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.302 | N/A | N/A | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
