YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|72533638, gi\|...
Organism:	Homo sapiens
Length:	161 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|72533638, gi|....

Description	E-value	Query Range	Subject Range
UCN3 - urocortin 3 (stresscopin)	1.0E-63	[1..161]	[1..161]
gi\|114629179 - gi\|114629179\|ref\|XP_507632.2\| PREDICTED: urocortin 3 [Pan troglodytes]	2.0E-63	[1..161]	[1..161]
gi\|122427915, gi... - gi\|62663790\|ref\|XP_574076.1\| PREDICTED: similar to Urocortin-3 precursor (Urocortin III) (Ucn III) [...	3.0E-63	[1..161]	[1..164]
gi\|109088107 - gi\|109088107\|ref\|XP_001104616.1\| PREDICTED: urocortin 3 (stresscopin) [Macaca mulatta]	2.0E-60	[1..161]	[1..161]
UCN3_MOUSE - Urocortin-3 OS=Mus musculus GN=Ucn3 PE=2 SV=1	8.0E-60	[1..161]	[1..164]
gi\|73949184 - gi\|73949184\|ref\|XP_850955.1\| PREDICTED: similar to Urocortin III precursor (Ucn III) [Canis familiar...	2.0E-50	[1..161]	[104..270]
gi\|94966424 - gi\|94966424\|dbj\|BAE94178.1\| urocortin 3 [Bos taurus]	3.0E-38	[1..161]	[1..166]
gi\|50235042, gi\|... - gi\|50235042\|gb\|AAT70727.1\| urocortin 3 precursor [Xenopus laevis], gi\|213626689\|gb\|AAI69893.1\| Uroco...	4.0E-35	[19..161]	[17..154]

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Predicted Domain #1

Region A:
Residues: [1-161]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLMPVHFLLL LLLLLGGPRT GLPHKFYKAK PIFSCLNTAL SEAEKGQWED ASLLSKRSFH  60
   61 YLRSRDASSG EEEEGKEKKT FPISGARGGA RGTRYRYVSQ AQPRGKPRQD TAKSPHRTKF 120
  121 TLSLDVPTNI MNLLFNIAKA KNLRAQAAAN AHLMAQIGRK K

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits