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View Structure Prediction Details

Protein: gi|119595146, gi...
Organism: Homo sapiens
Length: 313 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|119595146, gi....

Description E-value Query
Range
Subject
Range
gi|6691915 - gi|6691915|emb|CAB65727.1| hypothetical protein [Homo sapiens]
561.0 [0..1] [296..1]

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Predicted Domain #1
Region A:
Residues: [1-120]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALRICVTYT PALPIGLCTR CCLCLEQSPS WCHCLRGVSF LTFHLHQSVP LGDRDSLLMF  60
   61 TRQAGHFVEG SKAGRSRGRL CLSQALRVAV RGAFVSLWFA AGAGDRERNK GDKGAQTGAG 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.809 a.77.1 DEATH domain
View Download 0.809 a.77.1 DEATH domain
View Download 0.722 a.8.4 Description not found.
View Download 0.674 a.26.1 4-helical cytokines
View Download 0.668 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.612 a.100.1 6-phosphogluconate dehydrogenase C-terminal domain-like
View Download 0.605 a.118.8 TPR-like
View Download 0.602 f.32.1 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
View Download 0.585 d.189.1 PX domain

Predicted Domain #2
Region A:
Residues: [121-313]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSQEAEDVDV SRARRVTDAP QGTLCGTGNR NSGSQSARVV GVAHLGEAFR VGVEQAISSC  60
   61 PEEVHGRHGL SMEIMWARMD VALRSPGRGL LAGAGALCMT LAESSCPDYE RGRRACLTLH 120
  121 RHPTPHCSTW GLPLRVAGSW LTVVTVEALG GWRMGVRRTG QVGPTMHPPP VSGASPLLLH 180
  181 HLLLLLLIII LTC

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle