| Protein: | gi|42716297 |
| Organism: | Homo sapiens |
| Length: | 501 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42716297.
| Description | E-value | Query Range |
Subject Range |
|
|
894.0 | [0..1] | [501..1] |
|
|
805.0 | [0..53] | [501..1] |
|
|
786.0 | [0..53] | [501..1] |
|
|
786.0 | [0..54] | [501..1] |
|
Region A: Residues: [1-73] |
1 11 21 31 41 51
| | | | | |
1 MQVCSQPQRG CVREQSAINT APPSAHNAAS PGGARGHRVP LTEACKDSRI GGMMKTLLLF 60
61 VGLLLTWESG QVL
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.674 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.518 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.495 | a.159.2 | FF domain |
| View | Download | 0.472 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.463 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.432 | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.416 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.328 | d.56.1 | GroEL-intermediate domain like |
| View | Download | 0.325 | d.58.49 | YajQ-like |
| View | Download | 0.277 | a.61.1 | Retroviral matrix proteins |
|
Region A: Residues: [74-129] |
1 11 21 31 41 51
| | | | | |
1 GDQTVSDNEL QEMSNQGSKY VNKEIQNAVN GVKQIKTLIE KTNEERKTLL SNLEEA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [130-326] |
1 11 21 31 41 51
| | | | | |
1 KKKKEDALNE TRESETKLKE LPGVCNETMM ALWEECKPCL KQTCMKFYAR VCRSGSGLVG 60
61 RQLEEFLNQS SPFYFWMNGD RIDSLLENDR QQTHMLDVMQ DHFSRASSII DELFQDRFFT 120
121 REPQDTYHYL PFSLPHRRPH FFFPKSRIVR SLMPFSPYEP LNFHAMFQPF LEMIHEAQQA 180
181 MDIHFHSPAF QHPPTEF
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [327-501] |
1 11 21 31 41 51
| | | | | |
1 IREGDDDRTV CREIRHNSTG CLRMKDQCDK CREILSVDCS TNNPSQAKLR RELDESLQVA 60
61 ERLTRKYNEL LKSYQWKMLN TSSLLEQLNE QFNWVSRLAN LTQGEDQYYL RVTTVASHTS 120
121 DSDVPSGVTE VVVKLFDSDP ITVTVPVEVS RKNPKFMETV AEKALQEYRK KHREE
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
