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View Structure Prediction Details

Protein: gi|193787111, gi...
Organism: Homo sapiens
Length: 115 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|193787111, gi....

Description E-value Query
Range
Subject
Range
gi|31873838 - gi|31873838|emb|CAD97859.1| hypothetical protein [Homo sapiens]
203.0 [0..15] [115..147]
gi|12839220 - gi|12839220|dbj|BAB24472.1| unnamed protein product [Mus musculus]
195.0 [0..15] [114..213]
gi|76623769 - gi|76623769|ref|XP_580778.2| PREDICTED: hypothetical protein [Bos taurus]
167.0 [0..16] [115..12]
gi|57036114 - gi|57036114|ref|XP_533561.1| PREDICTED: hypothetical protein XP_533561 [Canis familiaris]
150.0 [0..16] [114..2]
gi|57525887, gi|... - gi|57525887|ref|NP_001003555.1| centromere protein P [Danio rerio], gi|50418539|gb|AAH78335.1| Centr...
100.0 [0..15] [111..186]
CENPP_CHICK - Centromere protein P OS=Gallus gallus GN=CENPP PE=1 SV=1
97.0 [0..15] [113..190]

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Predicted Domain #1
Region A:
Residues: [1-115]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAPSWSVLQ RSGDEEKYPD AVYLSEGPSS CSMGIRSASR PGFELVIVWR IQIDEDGKVF  60
   61 PKLDLLTKVP QRALELDKNR AIETAPLSFR TLVGLLGIEA ALESLIKSLC AEENN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.786 d.58.39 Glutamyl tRNA-reductase catalytic, N-terminal domain
View Download 0.726 d.326.1 Description not found.
View Download 0.707 d.129.6 Description not found.
View Download 0.698 a.7.8 GAT domain
View Download 0.698 a.7.8 GAT domain
View Download 0.692 d.87.2 CO dehydrogenase flavoprotein C-terminal domain-like
View Download 0.653 a.7.7 BAG domain
View Download 0.653 a.7.7 BAG domain
View Download 0.540 a.118.8 TPR-like
View Download 0.528 a.29.2 Bromodomain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle