YRC Public Data Repository - Protein Structure Prediction

Protein:	AMTN
Organism:	Homo sapiens
Length:	209 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AMTN.

Description	E-value	Query Range	Subject Range
gi\|112292464 - gi\|112292464\|gb\|AAI21813.1\| Amelotin [Homo sapiens]	1.0E-83	[1..209]	[1..208]
gi\|114594410 - gi\|114594410\|ref\|XP_001160426.1\| PREDICTED: similar to RSTI689 [Pan troglodytes]	1.0E-83	[1..209]	[1..209]
gi\|109074578 - gi\|109074578\|ref\|XP_001106135.1\| PREDICTED: similar to Protein UNQ689/PRO1329 homolog precursor [Mac...	3.0E-76	[1..196]	[1..196]
gi\|148673416, gi... - gi\|82898003\|ref\|XP_909777.1\| PREDICTED: amelotin [Mus musculus], gi\|148673416\|gb\|EDL05363.1\| mCG2158...	8.0E-74	[1..209]	[1..213]
AMTN_RAT - Amelotin OS=Rattus norvegicus GN=Amtn PE=1 SV=1	4.0E-65	[1..209]	[1..212]
gi\|73975369 - gi\|73975369\|ref\|XP_854599.1\| PREDICTED: similar to Protein UNQ689/PRO1329 homolog precursor [Canis f...	2.0E-59	[1..207]	[1..209]
gi\|76691467 - gi\|76691467\|ref\|XP_875818.1\| PREDICTED: similar to Protein UNQ689/PRO1329 homolog precursor, partial...	9.0E-31	[69..205]	[1..138]

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Predicted Domain #1

Region A:
Residues: [1-209]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSTILLFCL LGSTRSLPQL KPALGLPPTK LAPDQGTLPN QQQSNQVFPS LSLIPLTQML  60
   61 TLGPDLHLLN PAAGMTPGTQ THPLTLGGLN VQQQLHPHVL PIFVTQLGAQ GTILSSEELP 120
  121 QIFTSLIIHS LFPGGILPTS QAGANPDVQD GSLPAGGAGV NPATQGTPAG RLPTPSGTDD 180
  181 DFAVTTPAGI QRSTHAIEEA TTESANGIQ

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits