| Protein: | LEMD1 |
| Organism: | Homo sapiens |
| Length: | 181 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LEMD1.
| Description | E-value | Query Range |
Subject Range |
|
|
3.0E-60 | [1..181] | [1..181] |
|
|
9.0E-58 | [1..181] | [1..181] |
|
|
7.0E-44 | [2..155] | [1..155] |
|
|
4.0E-35 | [2..144] | [109..257] |
|
|
4.0E-35 | [2..144] | [110..258] |
|
|
4.0E-35 | [2..144] | [110..258] |
|
Region A: Residues: [1-112] |
1 11 21 31 41 51
| | | | | |
1 MVDVKCLSDC KLQNQLEKLG FSPGPILPST RKLYEKKLVQ LLVSPPCAPP VMNGPRELDG 60
61 AQDSDDSEEL NIILQGNIIL STEKSKKLKK WPEASTTKRK AVDTYCLDYK PS
|
| Detection Method: |  |
| Confidence: | 10.522879 |
| Match: | 1jeiA |
| Description: | Inner nuclear membrane protein emerin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [113-181] |
1 11 21 31 41 51
| | | | | |
1 KGRRWAARAP STRITYGTIT KERDYCAEDQ TIESWREEGF PVGLKLAVLG IFIIVVFVYL 60
61 TVENKSLFG
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.526 | N/A | N/A | c.51.3 | B12-dependend dehydatases associated subunit |
| View | Download | 0.505 | N/A | N/A | b.1.14 | Invasin/intimin cell-adhesion fragments |
| View | Download | 0.475 | N/A | N/A | b.55.1 | PH domain-like |
| View | Download | 0.405 | N/A | N/A | d.93.1 | SH2 domain |
| View | Download | 0.383 | N/A | N/A | b.55.1 | PH domain-like |
