| Protein: | gi|41349446 |
| Organism: | Homo sapiens |
| Length: | 833 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|41349446.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..833] | [1..833] |
|
|
0.0 | [1..816] | [1..815] |
|
|
0.0 | [16..833] | [1..818] |
|
|
0.0 | [1..833] | [1..809] |
|
|
0.0 | [14..833] | [13..812] |
|
Region A: Residues: [1-124] |
1 11 21 31 41 51
| | | | | |
1 MNAAGIRAPE AAGADGTRLA PGGSPCLRRR GRPEESPAAV VAPRGAGELQ AAGAPLRFHP 60
61 ASPRRLHPAS TPGPAWGWLL RRRRWAALLV LGLLVAGAAD GCELVPRHLR GRRATGSAAT 120
121 AASS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.272 | a.85.1 | Hemocyanin, N-terminal domain |
|
Region A: Residues: [125-431] |
1 11 21 31 41 51
| | | | | |
1 PAAAAGDSPA LMTDPCMSLS PPCFTEEDRF SLEALQTIHK QMDDDKDGGI EVEESDEFIR 60
61 EDMKYKDATN KHSHLHREDK HITIEDLWKR WKTSEVHNWT LEDTLQWLIE FVELPQYEKN 120
121 FRDNNVKGTT LPRIAVHEPS FMISQLKISD RSHRQKLQLK ALDVVLFGPL TRPPHNWMKD 180
181 FILTVSIVIG VGGCWFAYTQ NKTSKEHVAK MMKDLESLQT AEQSLMDLQE RLEKAQEENR 240
241 NVAVEKQNLE RKMMDEINYA KEEACRLREL REGAECELSR RQYAEQELEQ VRMALKKAEK 300
301 EFELRSS
|
| Detection Method: | |
| Confidence: | 21.39794 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [432-575] |
1 11 21 31 41 51
| | | | | |
1 WSVPDALQKW LQLTHEVEVQ YYNIKRQNAE MQLAIAKDEA EKIKKKRSTV FGTLHVAHSS 60
61 SLDEVDHKIL EAKKALSELT TCLRERLFRW QQIEKICGFQ IAHNSGLPSL TSSLYSDHSW 120
121 VVMPRVSIPP YPIAGGVDDL DEDT
|
| Detection Method: | |
| Confidence: | 5.522879 |
| Match: | 2iw5A |
| Description: | No description for 2iw5A was found. |
|
Region A: Residues: [576-624] |
1 11 21 31 41 51
| | | | | |
1 PPIVSQFPGT MAKPPGSLAR SSSLCRSRRS IVPSSPQPQR AQLAPHAPH
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [625-833] |
1 11 21 31 41 51
| | | | | |
1 PSHPRHPHHP QHTPHSLPSP DPDILSVSSC PALYRNEEEE EAIYFSAEKQ WEVPDTASEC 60
61 DSLNSSIGRK QSPPLSLEIY QTLSPRKISR DEVSLEDSSR GDSPVTVDVS WGSPDCVGLT 120
121 ETKSMIFSPA SKVYNGILEK SCSMNQLSSG IPVPKPRHTS CSSAGNDSKP VQEAPSVARI 180
181 SSIPHDLCHN GEKSKKPSKI KSLFKKKSK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
