| Protein: | C9orf72 |
| Organism: | Homo sapiens |
| Length: | 481 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for C9orf72.
| Description | E-value | Query Range |
Subject Range |
|
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0.0 | [1..481] | [1..481] |
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0.0 | [1..481] | [1..481] |
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0.0 | [1..481] | [1..481] |
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0.0 | [1..481] | [1..481] |
|
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0.0 | [1..481] | [1..481] |
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|
0.0 | [1..481] | [1..481] |
|
|
0.0 | [1..481] | [1..462] |
|
Region A: Residues: [1-76] |
1 11 21 31 41 51
| | | | | |
1 MSTLCPPPSP AVAKTEIALS GKSPLLAATF AYWDNILGPR VRHIWAPKTE QVLLSDGEIT 60
61 FLANHTLNGE ILRNAE
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [77-169] |
1 11 21 31 41 51
| | | | | |
1 SGAIDVKFFV LSEKGVIIVS LIFDGNWNGD RSTYGLSIIL PQTELSFYLP LHRVCVDRLT 60
61 HIIRKGRIWM HKERQENVQK IILEGTERME DQG
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [170-316] |
1 11 21 31 41 51
| | | | | |
1 QSIIPMLTGE VIPVMELLSS MKSHSVPEEI DIADTVLNDD DIGDSCHEGF LLNAISSHLQ 60
61 TCGCSVVVGS SAEKVNKIVR TLCLFLTPAE RKCSRLCEAE SSFKYESGLF VQGLLKDSTG 120
121 SFVLPFRQVM YAPYPTTHID VDVNTVK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.543 | d.68.3 | SirA-like |
| View | Download | 0.499 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.425 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.391 | a.28.2 | Colicin E immunity proteins |
| View | Download | 0.387 | a.4.12 | TrpR-like |
|
Region A: Residues: [317-481] |
1 11 21 31 41 51
| | | | | |
1 QMPPCHEHIY NQRRYMRSEL TAFWRATSEE DMAQDTIIYT DESFTPDLNI FQDVLHRDTL 60
61 VKAFLDQVFQ LKPGLSLRST FLAQFLLVLH RKALTLIKYI EDDTQKGKKP FKSLRNLKID 120
121 LDLTAEGDLN IIMALAEKIK PGLHSFIFGR PFYTSVQERD VLMTF
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
