| Protein: | gi|38229313, gi|... |
| Organism: | Homo sapiens |
| Length: | 739 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|38229313, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..739] | [35..773] |
|
|
0.0 | [1..739] | [35..773] |
|
|
0.0 | [1..739] | [19..757] |
|
|
0.0 | [1..639] | [229..867] |
|
|
0.0 | [46..739] | [349..1040] |
|
|
0.0 | [1..522] | [1..522] |
|
Region A: Residues: [1-161] |
1 11 21 31 41 51
| | | | | |
1 MGAVPCRRAL LLCNGMRYKL LQEGDIQVCV IRHPRTFLSK ILTSKFLRRW EPHHLTLADN 60
61 SLASATPTGY MENSVSYSAI EDVQLLSWEN APKYCLQLTI PGGTVLLQAA NSYLRDQWFH 120
121 SLQWKKKIYK YKKVLSNPSR WEVVLKEIRT LVDMALTSPL Q
|
| Detection Method: |  |
| Confidence: | 1.0 |
| Match: | 1x1fA |
| Description: | Solution structure of the PH domain of human Docking protein BRDG1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.46923761062082 | bayes_pls_golite062009 |
| protein binding | 0.127111860178639 | bayes_pls_golite062009 |
|
Region A: Residues: [162-739] |
1 11 21 31 41 51
| | | | | |
1 DDSINQAPLE IVSKLLSENT NLTTQEHENI IVAIAPLLEN NHPPPDLCEF FCKHCRERPR 60
61 SMVVIEVFTP VVQRILKHNM DFGKCPRLRL FTQEYILALN ELNAGMEVVK KFIQSMHGPT 120
121 GHCPHPRVLP NLVAVCLAAI YSCYEEFINS RDNSPSLKEI RNGCQQPCDR KPTLPLRLLH 180
181 PSPDLVSQEA TLSEARLKSV VVASSEIHVE VERTSTAKPA LTASAGNDSE PNLIDCLMVS 240
241 PACSTMSIEL GPQADRTLGC YVEILKLLSD YDDWRPSLAS LLQPIPFPKE ALAHEKFTKE 300
301 LKYVIQRFAE DPRQEVHSCL LSVRAGKDGW FQLYSPGGVA CDDDGELFAS MVHILMGSCY 360
361 KTKKFLLSLA ENKLGPCMLL ALRGNQTMVE ILCLMLEYNI IDNNDTQLQI ISTLESTDVG 420
421 KRMYEQLCDR QRELKELQRK GGPTRLTLPS KSTDADLARL LSSGSFGNLE NLSLAFTNVT 480
481 SACAEHLIKL PSLKQLNLWS TQFGDAGLRL LSEHLTMLQV LNLCETPVTD AGLLALSSMK 540
541 SLCSLNMNST KLSADTYEDL KAKLPNLKEV DVRYTEAW
|
| Detection Method: | |
| Confidence: | 24.0 |
| Match: | 2a0zA |
| Description: | The molecular structure of toll-like receptor 3 ligand binding domain |
Matching Structure (courtesy of the PDB): |
|
