| Protein: | PAPOLA |
| Organism: | Homo sapiens |
| Length: | 745 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PAPOLA.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [4..745] | [77..812] |
|
|
0.0 | [1..745] | [1..739] |
|
|
0.0 | [1..745] | [1..739] |
|
|
0.0 | [1..745] | [1..739] |
|
|
0.0 | [2..745] | [79..815] |
|
Region A: Residues: [1-500] |
1 11 21 31 41 51
| | | | | |
1 MPFPVTTQGS QQTQPPQKHY GITSPISLAA PKETDCVLTQ KLIETLKPFG VFEEEEELQR 60
61 RILILGKLNN LVKEWIREIS ESKNLPQSVI ENVGGKIFTF GSYRLGVHTK GADIDALCVA 120
121 PRHVDRSDFF TSFYDKLKLQ EEVKDLRAVE EAFVPVIKLC FDGIEIDILF ARLALQTIPE 180
181 DLDLRDDSLL KNLDIRCIRS LNGCRVTDEI LHLVPNIDNF RLTLRAIKLW AKRHNIYSNI 240
241 LGFLGGVSWA MLVARTCQLY PNAIASTLVH KFFLVFSKWE WPNPVLLKQP EECNLNLPVW 300
301 DPRVNPSDRY HLMPIITPAY PQQNSTYNVS VSTRMVMVEE FKQGLAITDE ILLSKAEWSK 360
361 LFEAPNFFQK YKHYIVLLAS APTEKQRLEW VGLVESKIRI LVGSLEKNEF ITLAHVNPQS 420
421 FPAPKENPDK EEFRTMWVIG LVFKKTENSE NLSVDLTYDI QSFTDTVYRQ AINSKMFEVD 480
481 MKIAAMHVKR KQLHQLLPNH
|
| Detection Method: |  |
| Confidence: | 151.0 |
| Match: | 1f5aA |
| Description: | Poly(A) polymerase, middle domain; Poly(A) polymerase N-terminal, catalytic domain; Poly(A) polymerase, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| RNA binding | 2.46555984694381 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 1.61922062344227 | bayes_pls_golite062009 |
| nucleic acid binding | 1.43322212500405 | bayes_pls_golite062009 |
| polynucleotide adenylyltransferase activity | 1.24026612395993 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.08480919674453 | bayes_pls_golite062009 |
| DNA binding | 0.920001549206154 | bayes_pls_golite062009 |
| binding | 0.888087430062829 | bayes_pls_golite062009 |
| catalytic activity | 0.75232920999699 | bayes_pls_golite062009 |
| transferase activity | 0.432029324907561 | bayes_pls_golite062009 |
|
Region A: Residues: [501-645] |
1 11 21 31 41 51
| | | | | |
1 VLQKKKKHST EGVKLTALND SSLDLSMDSD NSMSVPSPTS ATKTSPLNSS GSSQGRNSPA 60
61 PAVTAASVTN IQATEVSVPQ VNSSESSGGT SSESIPQTAT QPAISPPPKP TVSRVVSSTR 120
121 LVNPPPRSSG NAATSGNAAT KIPTP
|
| Detection Method: | |
| Confidence: | 1.54 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
|
Region A: Residues: [646-745] |
1 11 21 31 41 51
| | | | | |
1 IVGVKRTSSP HKEESPKKTK TEEDETSEDA NCLALSGHDK TEAKEQLDTE TSTTQSETIQ 60
61 TAASLLASQK TSSTDLSDIP ALPANPIPVI KNSIKLRLNR
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
