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View Structure Prediction Details

Protein: gi|119609365, gi...
Organism: Homo sapiens
Length: 188 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|119609365, gi....

Description E-value Query
Range
Subject
Range
gi|114642761 - gi|114642761|ref|XP_001149633.1| PREDICTED: ninjurin 2 [Pan troglodytes]
7.0E-78 [1..188] [1..188]
gi|109095031 - gi|109095031|ref|XP_001095186.1| PREDICTED: similar to ninjurin 2 [Macaca mulatta]
9.0E-75 [1..188] [1..188]
gi|73909149 - gi|73909149|gb|AAH57766.2| NINJ2 protein [Homo sapiens]
6.0E-60 [31..188] [1..158]
NINJ2_RAT - Ninjurin-2 OS=Rattus norvegicus GN=Ninj2 PE=2 SV=1
9.0E-54 [47..188] [1..144]
NINJ2_MOUSE - Ninjurin-2 OS=Mus musculus GN=Ninj2 PE=2 SV=1
4.0E-50 [47..188] [1..143]
gi|73947188 - gi|73947188|ref|XP_853215.1| PREDICTED: similar to ninjurin 1 [Canis familiaris]
2.0E-49 [41..175] [152..299]

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Predicted Domain #1
Region A:
Residues: [1-188]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGLSRQLCA LSHPKKAAET QTAEPGGAHA VCSRHPVRVK GLEGSEMESA RENIDLQPGS  60
   61 SDPRSQPINL NHYATKKSVA ESMLDVALFM SNAMRLKAVL EQGPSSHYYT TLVTLISLSL 120
  121 LLQVVIGVLL VVIARLNLNE VEKQWRLNQL NNAATILVFF TVVINVFITA FGAHKTGFLA 180
  181 ARASRNPL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 72.69897
Match: PF04923.3
Description: No description for PF04923.3 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.531 N/A N/A a.1.1 Globin-like
View Download 0.495 N/A N/A a.1.1 Globin-like
View Download 0.472 N/A N/A a.4.5 "Winged helix" DNA-binding domain
View Download 0.415 N/A N/A a.1.1 Globin-like
View Download 0.404 N/A N/A a.1.1 Globin-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle