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View Structure Prediction Details

Protein: STOM
Organism: Homo sapiens
Length: 288 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for STOM.

Description E-value Query
Range
Subject
Range
gi|60831910 - gi|60831910|gb|AAX36989.1| stomatin [synthetic construct]
3.0E-74 [1..288] [1..288]
gi|109110361 - gi|109110361|ref|XP_001090776.1| PREDICTED: stomatin isoform 2 [Macaca mulatta]
CCDS6830.1_1 - null
1.0E-73 [1..288] [1..288]
gi|14715077 - gi|14715077|gb|AAH10703.1| Stomatin [Homo sapiens]
2.0E-73 [1..288] [1..288]
gi|50757151 - gi|50757151|ref|XP_415401.1| PREDICTED: similar to Erythrocyte band 7 integral membrane protein (Sto...
1.0E-72 [14..283] [387..656]
gi|975689, gi|21... - gi|975689|emb|CAA62503.1| erthyrocyte band 7 integral membrane protein, protein 7.2B, stomatin [Mus ...
1.0E-69 [1..282] [1..282]
gi|149038926, gi... - gi|58865500|ref|NP_001011965.1| stomatin [Rattus norvegicus], gi|54035354|gb|AAH83895.1| Stomatin [R...
2.0E-69 [1..282] [1..282]
gi|73972043 - gi|73972043|ref|XP_855536.1| PREDICTED: similar to Erythrocyte band 7 integral membrane protein (Sto...
5.0E-69 [22..284] [42..304]

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Predicted Domain #1
Region A:
Residues: [1-78]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEKRHTRDS EAQRLPDSFK DSPSKGLGPC GWILVAFSFL FTVITFPISI WMCIKIIKEY  60
   61 ERAIIFRLGR ILQGGAKG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [79-288]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PGLFFILPCT DSFIKVDMRT ISFDIPPQEI LTKDSVTISV DGVVYYRVQN ATLAVANITN  60
   61 ADSATRLLAQ TTLRNVLGTK NLSQILSDRE EIAHNMQSTL DDATDAWGIK VERVEIKDVK 120
  121 LPVQLQRAMA AEAEASREAR AKVIAAEGEM NASRALKEAS MVITESPAAL QLRYLQTLTT 180
  181 IAAEKNSTIV FPLPIDMLQG IIGAKHSHLG 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.154902
Match: 1winA
Description: Solution Structure of the Band 7 Domain of the mouse Flotillin 2 Protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
structural molecule activity 0.834496144484266 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle