| Protein: | gi|37588848 |
| Organism: | Homo sapiens |
| Length: | 287 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|37588848.
| Description | E-value | Query Range |
Subject Range |
|
|
9.0E-83 | [1..287] | [8..294] |
|
|
3.0E-81 | [1..287] | [8..294] |
|
|
1.0E-74 | [20..287] | [9..276] |
|
|
7.0E-69 | [1..287] | [1..242] |
|
|
3.0E-68 | [1..287] | [1..282] |
|
Region A: Residues: [1-180] |
1 11 21 31 41 51
| | | | | |
1 MAKHEQILVL DPPTDLKFKG PFTDVVTTNL KLRNPSDRKV CFKVKTTAPR RYCVRPNSGI 60
61 IDPGSTVTVS VMLQPFDYDP NEKSKHKFMV QTIFAPPNTS DMEAVWKEAK PDELMDSKLR 120
121 CVFEMPNEND KLGITPPGNA PTVTSMSSIN NTVATPASYH TKDDPRGLSV LKQEKQKNDM 180
181
|
| Detection Method: |  |
| Confidence: | 41.09691 |
| Match: | 2criA |
| Description: | Solution structure of the MSP domain of mouse VAMP-associated proteinA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [181-287] |
1 11 21 31 41 51
| | | | | |
1 EPSKAVPLNA SKQDGPMPKP HSVSLNDTET RKLMEECKRL QGEMMKLSEE NRHLRDEGLR 60
61 LRKVAHSDKP GSTSTASFRD NVTSPLPSLL VVIAAIFIGF FLGKFIL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.690 | N/A | N/A | a.130.1 | Chorismate mutase II |
| View | Download | 0.557 | N/A | N/A | d.56.1 | GroEL-intermediate domain like |
| View | Download | 0.532 | N/A | N/A | a.8.2 | Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |
| View | Download | 0.527 | N/A | N/A | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| View | Download | 0.459 | N/A | N/A | a.7.8 | GAT domain |
