| Protein: | TAF1L |
| Organism: | Homo sapiens |
| Length: | 1826 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TAF1L.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1826] | [1..1826] |
|
|
0.0 | [1..1825] | [1..1807] |
|
|
0.0 | [1..1825] | [1..1807] |
|
|
0.0 | [1..1825] | [1..1807] |
|
Region A: Residues: [1-153] |
1 11 21 31 41 51
| | | | | |
1 MRPGCDLLLR AAATVTAAIM SDSDSEEDSS GGGPFTLAGI LFGNISGAGQ LEGESVLDDE 60
61 CKKHLAGLGA LGLGSLITEL TANEELTGTG GALVNDEGWI RSTEDAVDYS DINEVAEDES 120
121 QRHQQTMGSL QPLYHSDYDE DDYDADCEDI DCK
|
| Detection Method: |  |
| Confidence: | 15.0 |
| Match: | 1tbaA |
| Description: | TAF(II)230 TBP-binding fragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [154-214] |
1 11 21 31 41 51
| | | | | |
1 LMPPPPPPPG PMKKDKDQDA ITCVSESGED IILPSIIAPS FLASEKVDFS SYSDSESEMG 60
61 P
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [215-383] |
1 11 21 31 41 51
| | | | | |
1 QEATQAESED GKLTLPLAGI MQHDATKLLP SVTELFPEFR PGKVLRFLHL FGPGKNVPSV 60
61 WRSARRKRKK HRELIQEEQI QEVECSVESE VSQKSLWNYD YAPPPPPEQC LADDEITMMV 120
121 PVESKFSQST GDVDKVTDTK PRVAEWRYGP ARLWYDMLGV SEDGSGFDY
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [384-481] |
1 11 21 31 41 51
| | | | | |
1 GFKLRKTQHE PVIKSRMMEE FRKLEESNGT DLLADENFLM VTQLHWEDSI IWDGEDIKHK 60
61 GTKPQGASLA GWLPSIKTRN VMAYNVQQGF APTLDDDK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [482-583] |
1 11 21 31 41 51
| | | | | |
1 PWYSIFPIDN EDLVYGRWED NIIWDAQAMP RLLEPPVLAL DPNDENLILE IPDEKEEATS 60
61 NSPSKESKKE SSLKKSRILL GKTGVIREEP QQNMSQPEVK DP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [584-644] |
1 11 21 31 41 51
| | | | | |
1 WNLSNDEYYF PKQQGLRGTF GGNIIQHSIP AMELWQPFFP THMGPIKIRQ FHRPPLKKYS 60
61 F
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [645-887] |
1 11 21 31 41 51
| | | | | |
1 GALSQPGPHS VQPLLKHIKK KAKMREQERQ ASGGGELFFM RTPQDLTGKD GDLILAEYSE 60
61 ENGPLMMQVG MATKIKNYYK RKPGKDPGAP DCKYGETVYC HTSPFLGSLH PGQLLQALEN 120
121 NLFRAPVYLH KMPETDFLII RTRQGYYIRE LVDIFVVGQQ CPLFEVPGPN SRRANMHIRD 180
181 FLQVFIYRLF WKSKDRPRRI RMEDIKKAFP SHSESSIRKR LKLCADFKRT GMDSNWWVLK 240
241 SDF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [888-1269] |
1 11 21 31 41 51
| | | | | |
1 RLPTEEEIRA KVSPEQCCAY YSMIAAKQRL KDAGYGEKSF FAPEEENEED FQMKIDDEVH 60
61 AAPWNTTRAF IAAMKGKCLL EVTGVADPTG CGEGFSYVKI PNKPTQQKDD KEPQAVKKTV 120
121 TGTDADLRRL SLKNAKQLLR KFGVPEEEIK KLSRWEVIDV VRTMSTEQAH SGEGPMSKFA 180
181 RGSRFSVAEH QERYKEECQR IFDLQNKVLS STEVLSTDTD SISAEDSDFE EMGKNIENML 240
241 QNKKTSSQLS REWEEQERKE LRRMLLVAGS AASGNNHRDD VTASMTSLKS SATGHCLKIY 300
301 RTFRDEEGKE YVRCETVRKP AVIDAYVRIR TTKDEKFIQK FALFDEKHRE EMRKERRRIQ 360
361 EQLRRLKRNQ EKEKLKGPPE KK
|
| Detection Method: | |
| Confidence: | 18.045757 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1270-1331] |
1 11 21 31 41 51
| | | | | |
1 PKKMKERPDL KLKCGACGAI GHMRTNKFCP LYYQTNVPPS KPVAMTEEQE EELEKTVIHN 60
61 DN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1332-1713] |
1 11 21 31 41 51
| | | | | |
1 EELIKVEGTK IVFGKQLIEN VHEVRRKSLV LKFPKQQLPP KKKRRVGTTV HCDYLNIPHK 60
61 SIHRRRTDPM VTLSSILESI INDMRDLPNT HPFHTPVNAK VVKDYYKIIT RPMDLQTLRE 120
121 NVRKCLYPSR EEFREHLELI VKNSATYNGP KHSLTQISQS MLDLCDEKLK EKEDKLARLE 180
181 KAINPLLDDD DQVAFSFILD NIVTQKMMAV PDSWPFHHPV NKKFVPDYYK MIVNPVDLET 240
241 IRKNISKHKY QSRESFLDDV NLILANSVKY NGPESQYTKT AQEIVNICYQ TITEYDEHLT 300
301 QLEKDICTAK EAALEEAELE SLDPMTPGPY TSQPPDMYDT NTSLSTSRDA SVFQDESNLS 360
361 VLDISTATPE KQMCQGQGRL GE
|
| Detection Method: | |
| Confidence: | 40.522879 |
| Match: | 1eqfA |
| Description: | TAFII250 double bromodomain module |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1714-1826] |
1 11 21 31 41 51
| | | | | |
1 EDSDVDVEGY DDEEEDGKPK PPAPEGGDGD LADEEEGTVQ QPEASVLYED LLISEGEDDE 60
61 EDAGSDEEGD NPFSAIQLSE SGSDSDVGYG GIRPKQPFML QHASGEHKDG HGK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
