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View Structure Prediction Details

Protein: gi|18204598, gi|...
Organism: Homo sapiens
Length: 141 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18204598, gi|....

Description E-value Query
Range
Subject
Range
gi|192912, gi|109759 - gi|192912|gb|AAA63298.1| cystatin C, pir||A36163 cystatin C precursor - mouse
1.0E-42 [1..141] [1..140]
gi|109093125 - gi|109093125|ref|XP_001097284.1| PREDICTED: cystatin SA [Macaca mulatta]
8.0E-40 [1..141] [1..141]
gi|58081 - gi|58081|emb|CAA31253.1| ompA - cystatin C fusion preprotein (AA -21 to 120) [synthetic construct]
3.0E-39 [1..141] [1..141]
gi|55651412 - gi|55651412|ref|XP_514555.1| PREDICTED: similar to Cystatin SA precursor (Cystatin S5) isoform 3 [Pa...
5.0E-39 [1..141] [1..141]
CYTC_RAT - Cystatin-C OS=Rattus norvegicus GN=Cst3 PE=1 SV=2
4.0E-38 [1..141] [1..140]
CYTC_SAISC - Cystatin-C OS=Saimiri sciureus GN=CST3 PE=2 SV=1
4.0E-38 [20..141] [25..146]
CST1 - cystatin SN
4.0E-38 [21..141] [21..141]

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Predicted Domain #1
Region A:
Residues: [1-141]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQYLSTLLL LLATLAVALA WSPKEEDRII PGGIYNADLN DEWVQRALHF AISEYNKATK  60
   61 DDYYRRPLRV LRARQQTVGG VNYFFDVEVG RTICTKSQPN LDTCAFHEQP ELQKKQLCSF 120
  121 EIYEVPWENR RSLVKSRCQE S

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.30103
Match: 1g96A
Description: Cystatin C
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle