| Protein: | CYFIP1 |
| Organism: | Homo sapiens |
| Length: | 1253 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CYFIP1.
| Description | E-value | Query Range |
Subject Range |
|
|
2307.0 | [0..1] | [1253..19] |
|
|
2304.0 | [0..1] | [1253..27] |
|
|
2287.0 | [0..1] | [1253..82] |
|
Region A: Residues: [1-151] |
1 11 21 31 41 51
| | | | | |
1 MAAQVTLEDA LSNVDLLEEL PLPDQQPCIE PPPSSLLYQP NFNTNFEDRN AFVTGIARYI 60
61 EQATVHSSMN EMLEEGQEYA VMLYTWRSCS RAIPQVKCNE QPNRVEIYEK TVEVLEPEVT 120
121 KLMNFMYFQR NAIERFCGEV RRLCHAERRK D
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [152-326] |
1 11 21 31 41 51
| | | | | |
1 FVSEAYLITL GKFINMFAVL DELKNMKCSV KNDHSAYKRA AQFLRKMADP QSIQESQNLS 60
61 MFLANHNKIT QSLQQQLEVI SGYEELLADI VNLCVDYYEN RMYLTPSEKH MLLKVMGFGL 120
121 YLMDGSVSNI YKLDAKKRIN LSKIDKYFKQ LQVVPLFGDM QIELARYIKT SAHYE
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [327-548] |
1 11 21 31 41 51
| | | | | |
1 ENKSRWTCTS SGSSPQYNIC EQMIQIREDH MRFISELARY SNSEVVTGSG RQEAQKTDAE 60
61 YRKLFDLALQ GLQLLSQWSA HVMEVYSWKL VHPTDKYSNK DCPDSAEEYE RATRYNYTSE 120
121 EKFALVEVIA MIKGLQVLMG RMESVFNHAI RHTVYAALQD FSQVTLREPL RQAIKKKKNV 180
181 IQSVLQAIRK TVCDWETGHE PFNDPALRGE KDPKSGFDIK VP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [549-632] |
1 11 21 31 41 51
| | | | | |
1 RRAVGPSSTQ LYMVRTMLES LIADKSGSKK TLRSSLEGPT ILDIEKFHRE SFFYTHLINF 60
61 SETLQQCCDL SQLWFREFFL ELTM
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.773 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.742 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.718 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.665 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.659 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.636 | a.69.3 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |
| View | Download | 0.633 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.620 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.584 | a.59.1 | PAH2 domain |
| View | Download | 0.540 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.446 | a.39.4 | Hypothetical protein MTH865 |
| View | Download | 0.354 | a.4.1 | Homeodomain-like |
| View | Download | 0.329 | a.3.1 | Cytochrome c |
| View | Download | 0.325 | a.39.4 | Hypothetical protein MTH865 |
|
Region A: Residues: [633-877] |
1 11 21 31 41 51
| | | | | |
1 GRRIQFPIEM SMPWILTDHI LETKEASMME YVLYSLDLYN DSAHYALTRF NKQFLYDEIE 60
61 AEVNLCFDQF VYKLADQIFA YYKVMAGSLL LDKRLRSECK NQGATIHLPP SNRYETLLKQ 120
121 RHVQLLGRSI DLNRLITQRV SAAMYKSLEL AIGRFESEDL TSIVELDGLL EINRMTHKLL 180
181 SRYLTLDGFD AMFREANHNV SAPYGRITLH VFWELNYDFL PNYCYNGSTN RFVRTVLPFS 240
241 QEFQR
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [878-1114] |
1 11 21 31 41 51
| | | | | |
1 DKQPNAQPQY LHGSKALNLA YSSIYGSYRN FVGPPHFQVI CRLLGYQGIA VVMEELLKVV 60
61 KSLLQGTILQ YVKTLMEVMP KICRLPRHEY GSPGILEFFH HQLKDIVEYA ELKTVCFQNL 120
121 REVGNAILFC LLIEQSLSLE EVCDLLHAAP FQNILPRVHV KEGERLDAKM KRLESKYAPL 180
181 HLVPLIERLG TPQQIAIARE GDLLTKERLC CGLSMFEVIL TRIRSFLDDP IWRGPLP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1115-1191] |
1 11 21 31 41 51
| | | | | |
1 SNGVMHVDEC VEFHRLWSAM QFVYCIPVGT HEFTVEQCFG DGLHWAGCMI IVLLGQQRRF 60
61 AVLDFCYHLL KVQKHDG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.751 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.707 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.682 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.651 | a.8.11 | Description not found. |
| View | Download | 0.646 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.615 | d.6.1 | Prion-like |
| View | Download | 0.588 | a.8.11 | Description not found. |
| View | Download | 0.547 | a.64.1 | Saposin |
| View | Download | 0.488 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.399 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.389 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.388 | a.159.4 | Description not found. |
| View | Download | 0.371 | d.50.1 | dsRNA-binding domain-like |
|
Region A: Residues: [1192-1253] |
1 11 21 31 41 51
| | | | | |
1 KDEIIKNVPL KKMVERIRKF QILNDEIITI LDKYLKSGDG EGTPVEHVRC FQPPIHQSLA 60
61 SS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.662 | N/A | N/A | a.7.17 | Description not found. |
| View | Download | 0.563 | N/A | N/A | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.535 | N/A | N/A | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.489 | N/A | N/A | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.478 | N/A | N/A | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.470 | N/A | N/A | a.23.7 | Description not found. |
| View | Download | 0.420 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.403 | N/A | N/A | a.4.1 | Homeodomain-like |
