| Protein: | gi|47479697, gi|... |
| Organism: | Homo sapiens |
| Length: | 600 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|47479697, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..600] | [1..600] |
|
|
0.0 | [1..600] | [1..600] |
|
|
0.0 | [1..600] | [1..600] |
|
|
1.0E-91 | [1..589] | [1..592] |
|
|
6.0E-90 | [1..576] | [1..559] |
|
|
7.0E-86 | [1..484] | [1..496] |
|
|
3.0E-80 | [1..600] | [1..589] |
|
Region A: Residues: [1-141] |
1 11 21 31 41 51
| | | | | |
1 MSCRSYRVSS GHRVGNFSSC SAMTPQNLNR FRANSVSCWS GPGFRGLGSF GSRSVITFGS 60
61 YSPRIAAVGS RPIHCGVRFG AGCGMGFGDG RGVGLGPRAD SCVGLGFGAG SGIGYGFGGP 120
121 GFGYRVGGVG VPAAPSITAV T
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [142-407] |
1 11 21 31 41 51
| | | | | |
1 VNKSLLTPLN LEIDPNAQRV KKDEKEQIKT LNNKFASFID KVRFLEQQNK LLETKWSFLQ 60
61 EQKCIRSNLE PLFESYITNL RRQLEVLVSD QARLQAERNH LQDVLEGFKK KYEEEVVCRA 120
121 NAENEFVALK KDVDAAFMNK SDLEANVDTL TQEIDFLKTL YMEEIQLLQS HISETSVIVK 180
181 MDNSRDLNLD GIIAEVKAQY EEVARRSRAD AEAWYQTKYE EMQVTAGQHC DNLRNIRNEI 240
241 NELTRLIQRL KAEIEHAKAQ RAKLEA
|
| Detection Method: | |
| Confidence: | 2.44 |
| Match: | 1c1gA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [408-518] |
1 11 21 31 41 51
| | | | | |
1 AVAEAEQQGE ATLSDAKCKL ADLECALQQA KQDMARQLCE YQELMNAKLG LDIEIATYRR 60
61 LLEGEESRLC EGVGPVNISV SSSRGGLVCG PEPLVAGSTL SRGGVTFSGS S
|
| Detection Method: | |
| Confidence: | 10.0 |
| Match: | 1gk4A |
| Description: | Vimentin coil |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [519-600] |
1 11 21 31 41 51
| | | | | |
1 SVCATSGVLA SCGPSLGGAR VAPATGDLLS TGTRSGSMLI SEACVPSVPC PLPTQGGFSS 60
61 CSGGRSSSVR FVSTTTSCRT KY
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
