| Protein: | RNF115 |
| Organism: | Homo sapiens |
| Length: | 304 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RNF115.
| Description | E-value | Query Range |
Subject Range |
|
|
4.0E-54 | [1..304] | [1..304] |
|
|
1.0E-53 | [1..304] | [1..304] |
|
|
4.0E-53 | [18..304] | [18..305] |
|
|
8.0E-53 | [18..304] | [18..305] |
|
|
3.0E-51 | [18..304] | [147..434] |
|
Region A: Residues: [1-69] |
1 11 21 31 41 51
| | | | | |
1 MAEASAAGAD SGAAVAAHRF FCHFCKGEVS PKLPEYICPR CESGFIEEVT DDSSFLGGGG 60
61 SRIDNTTTT
|
| Detection Method: |  |
| Confidence: | 1.04 |
| Match: | 1y02A |
| Description: | Crystal Structure of a FYVE-type domain from caspase regulator CARP2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.586512315637526 | bayes_pls_golite062009 |
|
Region A: Residues: [70-133] |
1 11 21 31 41 51
| | | | | |
1 HFAELWGHLD HTMFFQDFRP FLSSSPLDQD NRANERGHQT HTDFWGARPP RLPLGRRYRS 60
61 RGSS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [134-304] |
1 11 21 31 41 51
| | | | | |
1 RPDRSPAIEG ILQHIFAGFF ANSAIPGSPH PFSWSGMLHS NPGDYAWGQT GLDAIVTQLL 60
61 GQLENTGPPP ADKEKITSLP TVTVTQEQVD MGLECPVCKE DYTVEEEVRQ LPCNHFFHSS 120
121 CIVPWLELHD TCPVCRKSLN GEDSTRQSQS TEASASNRFS NDSQLHDRWT F
|
| Detection Method: | |
| Confidence: | 5.522879 |
| Match: | 1z6uA |
| Description: | Np95-like ring finger protein isoform b [Homo sapiens] |
Matching Structure (courtesy of the PDB): |
|
