| Protein: | gi|219945, gi|13... |
| Organism: | Homo sapiens |
| Length: | 873 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|219945, gi|13....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..873] | [53..925] |
|
|
0.0 | [1..873] | [53..925] |
|
|
0.0 | [1..873] | [53..925] |
|
|
0.0 | [1..873] | [1..873] |
|
|
0.0 | [1..873] | [35..906] |
|
|
0.0 | [1..873] | [35..906] |
|
|
0.0 | [1..873] | [44..916] |
|
Region A: Residues: [1-152] |
1 11 21 31 41 51
| | | | | |
1 MDVGEEPLEK AARARTAKDP NTYKVLSLVL SVCVLTTILG CIFGLKPSCA KEVKSCKGRC 60
61 FERTFGNCRC DAACVELGNC CLDYQETCIE PEHIWTCNKF RCGEKRLTRS LCACSDDCKD 120
121 KGDCCINYSS VCQGEKSWVE EPCESINEPQ CP
|
| Detection Method: |  |
| Confidence: | 6.045757 |
| Match: | 1jv2B |
| Description: | Hybrid domain of integrin beta; Integrin beta A domain; Integrin beta tail domain; Integrin beta EGF-like domains |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [153-563] |
1 11 21 31 41 51
| | | | | |
1 AGFETPPTLL FSLDGFRAEY LHTWGGLLPV ISKLKKCGTY TKNMRPVYPT KTFPNHYSIV 60
61 TGLYPESHGI IDNKMYDPKM NASFSLKSKE KFNPEWYKGE PIWVTAKYQG LKSGTFFWPG 120
121 SDVEINGIFP DIYKMYNGSV PFEERILAVL QWLQLPKDER PHFYTLYLEE PDSSGHSYGP 180
181 VSSEVIKALQ RVDGMVGMLM DGLKELNLHR CLNLILISDH GMEQGSCKKY IYLNKYLGDV 240
241 KNIKVIYGPA ARLRPSDVPD KYYSFNYEGI ARNLSCREPN QHFKPYLKHF LPKRLHFAKS 300
301 DRIEPLTFYL DPQWQLALNP SERKYCGSGF HGSDNVFSNM QALFVGYGPG FKHGIEADTF 360
361 ENIEVYNLMC DLLNLTPAPN NGTHGSLNHL LKNPVYTPKH PKEVHPLVQC P
|
| Detection Method: | |
| Confidence: | 58.69897 |
| Match: | 2gsnA |
| Description: | No description for 2gsnA was found. |
|
Region A: Residues: [564-873] |
1 11 21 31 41 51
| | | | | |
1 FTRNPRDNLG CSCNPSILPI EDFQTQFNLT VAEEKIIKHE TLPYGRPRVL QKENTICLLS 60
61 QHQFMSGYSQ DILMPLWTSY TVDRNDSFST EDFSNCLYQD FRIPLSPVHK CSFYKNNTKV 120
121 SYGFLSPPQL NKNSSGIYSE ALLTTNIVPM YQSFQVIWRY FHDTLLRKYA EERNGVNVVS 180
181 GPVFDFDYDG RCDSLENLRQ KRRVIRNQEI LIPTHFFIVL TSCKDTSQTP LHCENLDTLA 240
241 FILPHRTDNS ESCVHGKHDS SWVEELLMLH RARITDVEHI TGLSFYQQRK EPVSDILKLK 300
301 THLPTFSQED
|
| Detection Method: | |
| Confidence: | 59.09691 |
| Match: | 1zm8A |
| Description: | Apo Crystal structure of Nuclease A from Anabaena sp. |
Matching Structure (courtesy of the PDB): |
|
