| Protein: | TCERG1 |
| Organism: | Homo sapiens |
| Length: | 1098 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TCERG1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [439..1098] | [2246..2894] |
|
|
0.0 | [1..1098] | [1..1098] |
|
|
0.0 | [1..1098] | [1..1104] |
|
|
4.0E-99 | [441..1098] | [1202..1870] |
|
|
1.0E-98 | [1..1098] | [1..1096] |
|
|
5.0E-97 | [1..1098] | [1..1100] |
|
|
1.0E-96 | [11..1098] | [52..1129] |
|
Region A: Residues: [1-415] |
1 11 21 31 41 51
| | | | | |
1 MAERGGDGGE SERFNPGELR MAQQQALRFR GPAPPPNAVM RGPPPLMRPP PPFGMMRGPP 60
61 PPPRPPFGRP PFDPNMPPMP PPGGIPPPMG PPHLQRPPFM PPPMSSMPPP PGMMFPPGMP 120
121 PVTAPGTPAL PPTEEIWVEN KTPDGKVYYY NARTRESAWT KPDGVKVIQQ SELTPMLAAQ 180
181 AQVQAQAQAQ AQAQAQAQAQ AQAQAQAQAQ AQAQAQAQAQ AQAQAQAQAQ AQAQAQAQAQ 240
241 AQVQAQVQAQ VQAQAVGAST PTTSSPAPAV STSTSSSTPS STTSTTTTAT SVAQTVSTPT 300
301 TQDQTPSSAV SVATPTVSVS TPAPTATPVQ TVPQPHPQTL PPAVPHSVPQ PTTAIPAFPP 360
361 VMVPPFRVPL PGMPIPLPGV AMMQIVSCPY VKTVATTKTG VLPGMAPPIV PMIHP
|
| Detection Method: |  |
| Confidence: | 4.154902 |
| Match: | 1y0fB |
| Description: | No description for 1y0fB was found. |
|
Region A: Residues: [416-580] |
1 11 21 31 41 51
| | | | | |
1 QVAIAASPAT LAGATAVSEW TEYKTADGKT YYYNNRTLES TWEKPQELKE KEKLEEKIKE 60
61 PIKEPSEEPL PMETEEEDPK EEPIKEIKEE PKEEEMTEEE KAAQKAKPVA TAPIPGTPWC 120
121 VVWTGDERVF FYNPTTRLSM WDRPDDLIGR ADVDKIIQEP PHKKG
|
| Detection Method: | |
| Confidence: | 3.53 |
| Match: | 1o6wA |
| Description: | Splicing factor prp40 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.526918523531992 | bayes_pls_golite062009 |
| protein binding | 0.437950218081596 | bayes_pls_golite062009 |
|
Region A: Residues: [581-806] |
1 11 21 31 41 51
| | | | | |
1 MEELKKLRHP TPTMLSIQKW QFSMSAIKEE QELMEEINED EPVKAKKRKR DDNKDIDSEK 60
61 EAAMEAEIKA ARERAIVPLE ARMKQFKDML LERGVSAFST WEKELHKIVF DPRYLLLNPK 120
121 ERKQVFDQYV KTRAEEERRE KKNKIMQAKE DFKKMMEEAK FNPRATFSEF AAKHAKDSRF 180
181 KAIEKMKDRE ALFNEFVAAA RKKEKEDSKT RGEKIKSDFF ELLSNH
|
| Detection Method: | |
| Confidence: | 7.0 |
| Match: | 1dg3A |
| Description: | Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain; Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [807-1098] |
1 11 21 31 41 51
| | | | | |
1 HLDSQSRWSK VKDKVESDPR YKAVDSSSMR EDLFKQYIEK IAKNLDSEKE KELERQARIE 60
61 ASLREREREV QKARSEQTKE IDREREQHKR EEAIQNFKAL LSDMVRSSDV SWSDTRRTLR 120
121 KDHRWESGSL LEREEKEKLF NEHIEALTKK KREHFRQLLD ETSAITLTST WKEVKKIIKE 180
181 DPRCIKFSSS DRKKQREFEE YIRDKYITAK ADFRTLLKET KFITYRSKKL IQESDQHLKD 240
241 VEKILQNDKR YLVLDCVPEE RRKLIVAYVD DLDRRGPPPP PTASEPTRRS TK
|
| Detection Method: | |
| Confidence: | 22.69897 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
