YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: MAN1A1
Organism: Homo sapiens
Length: 653 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MAN1A1.

Description E-value Query
Range
Subject
Range
gi|114609189 - gi|114609189|ref|XP_518868.2| PREDICTED: mannosidase, alpha, class 1A, member 1 [Pan troglodytes]
0.0 [1..653] [370..1022]
gi|149038629, gi... - gi|75905483|ref|NP_001028828.1| mannosidase, alpha, class 1A, member 1 [Rattus norvegicus], gi|14903...
0.0 [1..653] [1..655]
MA1A1_MOUSE - Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA OS=Mus musculus GN=Man1a1 PE=1 SV=1
0.0 [1..653] [1..655]
gi|7513458 - pir||S78554 mannosyl-oligosaccharide 1,2-alpha-mannosidase (EC 3.2.1.113), endoplasmic reticulum - p...
MA1A1_PIG - Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA OS=Sus scrofa GN=MAN1A1 PE=1 SV=1
0.0 [1..653] [1..659]
gi|416180, gi|631290 - pir||S38965 mannosyl-oligosaccharide 1,2-alpha-mannosidase (EC 3.2.1.113), endoplasmic reticulum - h...
0.0 [35..653] [7..625]
gi|73981135 - gi|73981135|ref|XP_849121.1| PREDICTED: similar to Mannosyl-oligosaccharide 1,2-alpha-mannosidase IB...
0.0 [1..642] [1..645]

Back

Predicted Domain #1
Region A:
Residues: [1-62]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVGGLLPLF SSPAGGVLGG GLGGGGGRKG SGPAALRLTE KFVLLLVFSA FITLCFGAIF  60
   61 FL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [63-174]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PDSSKLLSGV LFHSSPALQP AADHKPGPGA RAEDAAEGRA RRREEGAPGD PEAALEDNLA  60
   61 RIRENHERAL REAKETLQKL PEEIQRDILL EKKKVAQDQL RDKAPFRGLP PV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [175-653]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DFVPPIGVES REPADAAIRE KRAKIKEMMK HAWNNYKGYA WGLNELKPIS KGGHSSSLFG  60
   61 NIKGATIVDA LDTLFIMEMK HEFEEAKSWV EENLDFNVNA EISVFEVNIR FVGGLLSAYY 120
  121 LSGEEIFRKK AVELGVKLLP AFHTPSGIPW ALLNMKSGIG RNWPWASGGS SILAEFGTLH 180
  181 LEFMHLSHLS GNPIFAEKVM NIRTVLNKLE KPQGLYPNYL NPSSGQWGQH HVSVGGLGDS 240
  241 FYEYLLKAWL MSDKTDLEAK KMYFDAVQAI ETHLIRKSSS GLTYIAEWKG GLLEHKMGHL 300
  301 TCFAGGMFAL GADAAPEGMA QHYLELGAEI ARTCHESYNR TFMKLGPEAF RFDGGVEAIA 360
  361 TRQNEKYYIL RPEVMETYMY MWRLTHDPKY RKWAWEAVEA LENHCRVNGG YSGLRDVYLL 420
  421 HESYDDVQQS FFLAETLKYL YLIFSDDDLL PLEHWIFNSE AHLLPILPKD KKEVEIREE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1nxcA
Description: Structure of mouse Golgi alpha-1,2-mannosidase IA reveals the molecular basis for substrate specificity among Class I enzymes (family 47 glycosidases)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
mannosyl-oligosaccharide mannosidase activity 7.089685350864 bayes_pls_golite062009
mannosyl-oligosaccharide 1,2-alpha-mannosidase activity 6.95179264736435 bayes_pls_golite062009
mannosidase activity 5.20286438265852 bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds 4.31319275372149 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 3.65589746311782 bayes_pls_golite062009
hydrolase activity 2.67964748309919 bayes_pls_golite062009
binding 1.49199031708525 bayes_pls_golite062009
catalytic activity 1.31873306707813 bayes_pls_golite062009
cation binding 0.362242764130218 bayes_pls_golite062009
metal ion binding 0.362242764130218 bayes_pls_golite062009
protein binding 0.36081692928767 bayes_pls_golite062009
ion binding 0.355220167272296 bayes_pls_golite062009
calcium ion binding 0.121126738064555 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle